Gene Sputcn32_2302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2302 
Symbol 
ID5080275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2652046 
End bp2654919 
Gene Length2874 bp 
Protein Length957 aa 
Translation table11 
GC content47% 
IMG OID640499465 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_001183822 
Protein GI146293398 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000141755 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATATC AGGTGTTAGC CAGAAAATGG CGCCCTGCCA CATTTGAACA AATGGTTGGT 
CAAAGCCATG TATTGCATGC CTTAACCAAT GCACTAAGTC AACAGCGTTT ACACCATGCT
TACCTGTTTA CAGGGACGCG AGGCGTAGGT AAAACCAGCT TAGCGCGACT CTTTGCCAAA
GGCTTAAATT GCGAACAAGG TGTCACTGCC ACCCCCTGCG GCGTATGCGG TAGTTGTGTT
GAAATTGCCC AAGGTCGATT TGTCGATTTA ATTGAAGTTG ATGCAGCGTC CCGCACGAAG
GTCGATGATA CGCGCGAGCT GCTGGACAAT GTGCAGTATC GCCCGACCCG TGGCCGTTTT
AAGGTTTATC TTATCGACGA AGTGCATATG CTGTCGCGCA GCAGTTTTAA CGCACTGCTT
AAGACCTTAG AAGAACCCCC TGAGCACGTT AAATTTCTCC TCGCGACAAC AGACCCACAG
AAACTACCCG TGACTGTGTT ATCCCGTTGT TTACAATTTA ATTTAAAAAG TTTGACCCAG
CAGGAAATTG GCACTCAACT TAATCATATT TTGACCCAAG AGCAGTTCCC CTTTGAGGTT
GAAGCGCTAA CACTCCTTGC CAAAGCCGCC AATGGTAGTA TGCGTGATGC GTTGAGCTTA
ACGGATCAGG CCATTGCTTT TGGTGGTGGT ACTGTGATGC TCACACAAGT GCAGACCATG
CTTGGTAGTA TTGATGAGCA ACACGTTATC GCCTTACTGA AAGCCTTAAC GGATGCCGAT
ATCACAGTAC TAATGCAAAC CAGTGCCCAA GTGCTCGCGT ACGGCGCCGA TGCCCAAGAA
GTGCTGCGCA GTTTGCTTGA GCTGTTACAT CAAATTACTC TAACGCAGTT TGCCCCCGCT
TGTGCGCAGC AGTCCTTATA CAGCGCACAA ATTCGTGCTT TTGCTGAGCA ATTAACGCCG
GAGCAAGTAC AGCTTTATTA TCAGATCCTA TTAACGGGTC GCAAGGATTT ACCCCATGCC
CCCGATCCTA AATCAGGCCT AGAAATGGCA CTCTTACGGG CCGTTGCCTT TGTGCCAGAA
AAGCCCGTTA AACGCTGGCA AGTCGAATCG CCAGCCGAGG TGAGTTTACC CGTAGGGCAA
ACGTCACCTT CATTGGCGGC GTTAGCGACA TCGGTAGCTG AAAAAAAAAC AGATTTAGTT
GAACAACCTA CAGATGTTAA CGTACATGCT GCAGTTGAGA TTAATGCACC TTCGGATACA
GCAGATAGCG CTTTGTTCGC AGAGCAAACG CTGATCATTA GCCAAGCCCT AAGTCAGGGA
TATAAGTTAT CTGAATCCAT TGCACCAACA AGCATCGAGG TACCTGTCGC TGCGATATCG
CAAAGTGAAG ATACCAAAGT CGAAACACTG GTCTCAACCA ATGAGCAGGC AGTTGTAAAT
AACACTGACA GTGATACCCA ATTAGATTAT GTCTATGGCC ATGGGGATTA CACCCAAGAT
GTCGCGCCAT TGGATATTTA TCAAGATGAT TATGCGAGCT TTTCTTCTGA GTCATACAGT
TCGTTGACTC AGGAAATGGT GGCTGAACAA GCGACTATTA ACCCTGTTAG CCCTGCAACT
CAAACCTCAA CTCAAGTTGA AAATACCACT GGAGTCACCA TTCCAACCGC CACAGGCATC
GCAGTGGATC CCTCTTTAGG GCAATCCAGT TTCAAGCAAA CTGCCACAGC CTCGTTGGAG
GATGACGATA TTTTATCGGC GGTATTAGCT GCAAGAGAGT CGCTGTTGTC GGATCTCGAT
GCCTTGAGCG CGAAGGATGG TGATGAAAAA AAGCCTTCAC TGGATTTTAA ACGTAAAGAG
CCAACAATTG GCCCGTTATC TGCCACCAGA TCAGATATAA CCACTTCTCC TAAAGCGGTA
AAGGCGGTAT CTCAGTCTGT AGAATCCATT GACTCAGAAT TTGATTTTGA CGATGATTTT
GAGCCCGTGC CACAGAGGGA TGGAGGGTTC GCTCAAAGCG TTACACAAGC AAACAAAAAT
CCAGAAGCAT CGCAACCTTT AACACAAAAT GGGCAAATAA CACAAAATGG GCAAAAACCT
TCGGGGGAAA AGCCCGTCAG CGTCGATGAT CCCAATGATC GTCCGCCTTG GGAGGCTGCC
CCAGCTACAA ATATGCAGCA TCCTGTGGTA CACCCTGTTT CAGCGTTGGA GCCAGTAGTT
CCTACTGCAA TGCAAGATGA ATTGGCACCA ATTGATCAGG CGCCCCATAC GCCCGTTTCA
CTTATGAGCG AGCCTATAGA GGATGCAGCC AAGGAATCAT TAACTGAACC AGTAACGGGT
TTGTCGAATC AAACCGGACT GAGTGTAGTG CAGCCAGTCA GTGGTAATCC ATTGGATTTA
CATTGGTATA AGTTAATGGC GAGTTTAGAT ATTGGCGGTC GAGTACGCCA ACTTGCGGTT
AATTCAGTAT GCCAAGCGCA AAGCGATCCA CTGCCATTAC TGTTAAAACC CGATCAAAAA
CACTTAGCAG CCGATGTCGC AATCGTGCAA TTAGAACAAG CATTGACGGT GGCGCTCGGG
AATCCAAGGC GAGTACAAGT AGTCATAGGA AGCGATCCAA AGCGGGAAAC ACCCCTTGAG
TTACGTAAGC GTTTTCATCA AGAACTATTA CAACGGGCAC AGCAGTCATT AATTAAAGAC
GATAATGTTC AATGGCTTAT TCAGCGTTTG GGTGCAGAGC TTGATACCGA TACTTTAGTG
TATCCTCCCG ATCTGTTAAA CCAACGGAGC CAGCAGATCC AAGCGTTACC TGAACCAGAG
TTGACGAATG AGTTCACTCA GAGCGAGGGT AAACTAGCGC TAAGTAAGGC TTAA
 
Protein sequence
MSYQVLARKW RPATFEQMVG QSHVLHALTN ALSQQRLHHA YLFTGTRGVG KTSLARLFAK 
GLNCEQGVTA TPCGVCGSCV EIAQGRFVDL IEVDAASRTK VDDTRELLDN VQYRPTRGRF
KVYLIDEVHM LSRSSFNALL KTLEEPPEHV KFLLATTDPQ KLPVTVLSRC LQFNLKSLTQ
QEIGTQLNHI LTQEQFPFEV EALTLLAKAA NGSMRDALSL TDQAIAFGGG TVMLTQVQTM
LGSIDEQHVI ALLKALTDAD ITVLMQTSAQ VLAYGADAQE VLRSLLELLH QITLTQFAPA
CAQQSLYSAQ IRAFAEQLTP EQVQLYYQIL LTGRKDLPHA PDPKSGLEMA LLRAVAFVPE
KPVKRWQVES PAEVSLPVGQ TSPSLAALAT SVAEKKTDLV EQPTDVNVHA AVEINAPSDT
ADSALFAEQT LIISQALSQG YKLSESIAPT SIEVPVAAIS QSEDTKVETL VSTNEQAVVN
NTDSDTQLDY VYGHGDYTQD VAPLDIYQDD YASFSSESYS SLTQEMVAEQ ATINPVSPAT
QTSTQVENTT GVTIPTATGI AVDPSLGQSS FKQTATASLE DDDILSAVLA ARESLLSDLD
ALSAKDGDEK KPSLDFKRKE PTIGPLSATR SDITTSPKAV KAVSQSVESI DSEFDFDDDF
EPVPQRDGGF AQSVTQANKN PEASQPLTQN GQITQNGQKP SGEKPVSVDD PNDRPPWEAA
PATNMQHPVV HPVSALEPVV PTAMQDELAP IDQAPHTPVS LMSEPIEDAA KESLTEPVTG
LSNQTGLSVV QPVSGNPLDL HWYKLMASLD IGGRVRQLAV NSVCQAQSDP LPLLLKPDQK
HLAADVAIVQ LEQALTVALG NPRRVQVVIG SDPKRETPLE LRKRFHQELL QRAQQSLIKD
DNVQWLIQRL GAELDTDTLV YPPDLLNQRS QQIQALPEPE LTNEFTQSEG KLALSKA