Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2287 |
Symbol | |
ID | 5080259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2635575 |
End bp | 2636576 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640499449 |
Product | cytochrome-c peroxidase |
Protein accession | YP_001183807 |
Protein GI | 146293383 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1858] Cytochrome c peroxidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00278861 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTAAAC TCACATCTAT CGCTATTTTC ATCGCAGGTA TGTTTGCCAG CGCCCATGCC ACCAGTGCAG AGCCCATTGA GGTGATCGCC GCGGCTAAGA TCACTGAGCC AGAAAAAGTC GAATTAGGTA AAATGCTATT CTTCGAACCA CGATTATCAA AGTCTGGGTT TATCTCTTGT AACTCATGTC ATAATTTATC GACTGGCGGG GTTGATGCAC TACCAACGTC AATCGGGCAC CACTGGCAAG AAGGTCCTAT TAATTCGCCC ACAGTGCTTA ATGCTGATTT TATGCTGGCT CAATTTTGGG ACGGCCGCGC AAGTGATTTA AAAGAGCAAG CTGCTGGCCC GATTGCCAAC CCAAAAGAAA TGGGCTTTAC CCATGAACTT GCAACTGAAA CGATTGCCTC TATGCCTGCT TATCGAGCGC GTTTCGCTAA AGTCTATGGC GATGAAACCG TCAGCATTGA CCGTTTAACC GATGCTATTG CCGCCTTTGA AAAAACCTTA GTAACTCCCA ACAGTCCCTT CGATCAATAC CTCTTAGGCA AGCAAGAGGC GATTAGCGCA GATGCCAAAG CGGGTTATCA ACTGTTTAAA GATAAGGGTT GTGTCAGTTG CCATAATGGT CCTGCAGTCG GTGGAACCAT GTTTATGAAG ATGGGACTTA TCAAGCCGTT CCACACAAAC AATCCTGCTG AAGGTCGTAA GGGCGTTACT GGCAAAGAGG GGGATAAATT TGTATTTAAA GTACCTACAT TACGTAATAT TGAACTCACC TATCCCTACT TCCATGATGG TAGCGTATGG ACCTTGGAAG AAGCGGTAAA TACCATGGCC GATATCCAGC TAGGACAAAA ATTATCAGAT AAAGAAGTGA AAGAGATGGT CGCCTTCCTT GACTCTTTAA CGGGTGATCA ACCACAGATT ACCTTACCTA TACTACCCCC ATCGAATAAA GATACGCCGC GTCCAGTTCC TTTTGGACGA AGTGCGCAAT AA
|
Protein sequence | MTKLTSIAIF IAGMFASAHA TSAEPIEVIA AAKITEPEKV ELGKMLFFEP RLSKSGFISC NSCHNLSTGG VDALPTSIGH HWQEGPINSP TVLNADFMLA QFWDGRASDL KEQAAGPIAN PKEMGFTHEL ATETIASMPA YRARFAKVYG DETVSIDRLT DAIAAFEKTL VTPNSPFDQY LLGKQEAISA DAKAGYQLFK DKGCVSCHNG PAVGGTMFMK MGLIKPFHTN NPAEGRKGVT GKEGDKFVFK VPTLRNIELT YPYFHDGSVW TLEEAVNTMA DIQLGQKLSD KEVKEMVAFL DSLTGDQPQI TLPILPPSNK DTPRPVPFGR SAQ
|
| |