Gene Sputcn32_2274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2274 
SymbolgltA 
ID5080246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2618727 
End bp2620013 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content45% 
IMG OID640499436 
Producttype II citrate synthase 
Protein accessionYP_001183794 
Protein GI146293370 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01798] citrate synthase I (hexameric type) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.58341e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATT TAAGAGCCAA ATTAGAATTA CCAGGGAACG ACTCGATAGA ATTGCCAGTA 
AAGCAGGGAT CCGCTGGTTT TGATGTAATC GATATCAGTA AACTTGGCAG CAAAGGTTAC
TTTACCTTTG ATCCAGGTTT TCTCGCGACA GCCTCCTGTG AATCTGCAAT AACCTATATC
GATGGCGATC AAGGTATATT GTTACACCGT GGCTATCCAA TTGAGCAACT CGCCGTTGAC
TCCGATTACC TAGACCTGTG TTATCTGTTG CTTTACGGTG AACTGCCGAC GAAAGCGCAA
TATGCTGAGT TTGTACATAC AGTAAAAACC CACACTATGG TCCATGAGCA GCTAGCCTTC
TTCTTTAGAG GCTTCCGTCG TGATGCTCAT CCTATGGCGA TGTTATGTGG TGTGACTGGT
GCATTGTCTG CATTTTACCA AGACTCACTC GATGTCAACG ATCCTCGCCA CCGCGAAATC
GCCGCTTATC GCCTAGTCTC CAAAATGCCA ACGATTGCTG CTATGTGCTA CAAGTATTCT
TCAGGCCAAC CATTCGTTTA CCCACGTAAT GACTTGAGCT ATGCAGGCAA CTTCTTAAGC
ATGATGTTTG CAGTGCCGTG TGAAGAGTAC AAAGTAAATC CAATTGTTGA ACGCGCTATG
GACAGGATCT TCATTTTACA TGCCGATCAT GAACAAAATG CATCAACCTC AACCGTACGT
TTAGCCGGTT CTTCAGGTGC CAATCCATTT GCCTGTATTG CAGCGGGTAT TGCTTCACTG
TGGGGTCCTG CTCACGGCGG TGCCAATGAA GCATGCTTAC AAATGTTGGA AGAAATCGGT
TCTGTAGACC GTATTCCTGA ATTCATTGAA CGGGCGAAAG ACAAGAATGA TCCATTCCGT
CTGATGGGCT TTGGACACCG TGTTTACAAA AACTTTGATC CTCGTGCCAA AGTGATGCGT
GAAACCTGTC ATGAAGTGTT AAAAGAGCTA AAAGTACAAG ATCCACTGTT AGATGTAGCA
ATGGAACTTG AACGTATTGC CCTTGAGGAT GAATACTTTA TTTCTAAAAA GCTGTATCCA
AACGTCGATT TCTACTCTGG CATCATCATG AAAGCCATTG GTATTCCGAC CAGTATGTTC
ACTGTGCTGT TCGCACTGGC CCGTACTGTA GGCTGGATTG CCCACTGGAA AGAAATGTTA
GATCAACCCG GTCATAAGAT CAGCCGTCCA CGTCAATTGT ACACTGGCGA AGTCGCACGC
GATTTTGTTG ACTTAGACAA ACGCTAA
 
Protein sequence
MADLRAKLEL PGNDSIELPV KQGSAGFDVI DISKLGSKGY FTFDPGFLAT ASCESAITYI 
DGDQGILLHR GYPIEQLAVD SDYLDLCYLL LYGELPTKAQ YAEFVHTVKT HTMVHEQLAF
FFRGFRRDAH PMAMLCGVTG ALSAFYQDSL DVNDPRHREI AAYRLVSKMP TIAAMCYKYS
SGQPFVYPRN DLSYAGNFLS MMFAVPCEEY KVNPIVERAM DRIFILHADH EQNASTSTVR
LAGSSGANPF ACIAAGIASL WGPAHGGANE ACLQMLEEIG SVDRIPEFIE RAKDKNDPFR
LMGFGHRVYK NFDPRAKVMR ETCHEVLKEL KVQDPLLDVA MELERIALED EYFISKKLYP
NVDFYSGIIM KAIGIPTSMF TVLFALARTV GWIAHWKEML DQPGHKISRP RQLYTGEVAR
DFVDLDKR