| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2262 |
|---|
| Symbol | |
|---|
| ID | 5080234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 2605813 |
|---|
| End bp | 2606547 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640499424 |
|---|
| Product | NAD-dependent deacetylase |
|---|
| Protein accession | YP_001183782 |
|---|
| Protein GI | 146293358 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACCAAC ATATAGTGGT ATTAACTGGC GCGGGGATCT CTGCTGAATC GGGATTGCGT
ACCTTTCGCG ATCAAGATGG TTTATGGGAA GAGCATCATA TTGAAGACGT TGCTACACCA
GAAGGCTATG AGCGTGATGC TGAGTTAGTG GAACGATTTT ATAATAGCCG TTGGCAACAA
TTGCATAGTG GGGCAGTGGC TCCAAACCCC GCACATCAGG CTTTAGCAAA ACTCGAAGCG
CAGTTTGTAG GGCAATTATT GATAGTAACG CAGAATATTG ATGATTTGCA TGAGCGAGCA
GGCTCCCGCC GGTTGTTGCA TATGCATGGC GAATTGTCTA AAGGTCGGTG CCCGCGTTCG
CGTCAAACCT TTCTTTTGCG TGAGCCATTT GGTCCTGATA ATTGCTGTAC CTGCTGTATT
CCGGCTCAGC GTTTACGTCC CCACGTGGTC TGGTTTGGTG AAATGCCATT AGGAATGGAT
CGAATTCATG ATGCGCTTGA TAGTTGCGAT CTGTTTATTG CAATAGGAAC CTCTGGCACA
GTCTATCCCG CAGCAGGGTT TGTGGATAGC GCGAATCATC ATGGTGCTCA GACGGTTGAA
GTGAATTTAA TGGCTCCCGA TAGACACAGT CAATTTCAAT ATCACCTTAC AGGCAAAGCG
GGTGATATAG TGCCTAGGCT TGTTGATACC ATTTTGGCAG GTAAAGTGAT TGGTAGCGAC
TTGGTGACAA TATGA
|
|---|
| Protein sequence | MYQHIVVLTG AGISAESGLR TFRDQDGLWE EHHIEDVATP EGYERDAELV ERFYNSRWQQ
LHSGAVAPNP AHQALAKLEA QFVGQLLIVT QNIDDLHERA GSRRLLHMHG ELSKGRCPRS
RQTFLLREPF GPDNCCTCCI PAQRLRPHVV WFGEMPLGMD RIHDALDSCD LFIAIGTSGT
VYPAAGFVDS ANHHGAQTVE VNLMAPDRHS QFQYHLTGKA GDIVPRLVDT ILAGKVIGSD
LVTI
|
|---|
| |