Gene Sputcn32_2255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2255 
Symbol 
ID5080227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2599610 
End bp2600284 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content42% 
IMG OID640499417 
Producttwo component transcriptional regulator 
Protein accessionYP_001183775 
Protein GI146293351 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.39138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATTT TGGTTGTTGA AGATGATGTT ATTTTATCCC ACCACCTAAA AGTACAACTA 
AGCGATTTAG GCAATCAGGT ACAAGTTGCC CTCACGGCTA AAGAAGGGTT TTATCAAGCC
ACGAATTACC CCATCGATGT TGCGATTGTC GACTTGGGCT TACCAGACCA AGATGGGATC
AGCCTTATTC AGCAACTGCG TGACGCAGAA CTCAAAGCCC CTATTCTGAT CTTAACAGCG
CGAGTAAACT GGCAAGATAA AGTGGAAGGT CTCAATGCTG GTGCTGACGA CTATTTAGTC
AAACCTTTTC AAAAAGAAGA ACTTGTTGCT AGGCTAGATG CTTTAGTACG CCGCAGTGCT
GGATTCGTTA AACCGGTTAT CACAAGTGGG GAGTTAAAAC TTGATCTCGC CGCAAAACAA
GTCACGCTTG CCAATGAAGT GATGGAAGTC ACCGCTTTTG AATATTTAAT TCTCGAATAT
TTAATGCGTC ATTGCCATGA AGTTGTCGCT AAGCAACGTT TACTCGATGT GATTTATGGC
GATAAAGAAG GAGACCCCAA TACAATTGAA GTGATGGTGA GTCGTCTACG TAAAAAACTT
ACCCGAGATG GTATAGATAA TCCTATAGTA ACAATTCGTG GCCAAGGATA TAAATTTAAC
CTGCCATGCA ACTAA
 
Protein sequence
MRILVVEDDV ILSHHLKVQL SDLGNQVQVA LTAKEGFYQA TNYPIDVAIV DLGLPDQDGI 
SLIQQLRDAE LKAPILILTA RVNWQDKVEG LNAGADDYLV KPFQKEELVA RLDALVRRSA
GFVKPVITSG ELKLDLAAKQ VTLANEVMEV TAFEYLILEY LMRHCHEVVA KQRLLDVIYG
DKEGDPNTIE VMVSRLRKKL TRDGIDNPIV TIRGQGYKFN LPCN