| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2247 |
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| Symbol | |
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| ID | 5080219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2587532 |
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| End bp | 2588194 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640499409 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001183767 |
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| Protein GI | 146293343 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.998494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCAAG AAAATTTAAA TATTATTATC GCAGACGATC ATCCATTGTT CAGAAATGCA
CTACGTCAAG CATTGACCAG TGCCTTTGAG CAAGCCAAAT GGTATGAAGC CGACAGTGCC
GAAGCCTTAC AAACGGTTTT GGATACACAT GATGTAAGCT ACGACTTGGT TTTACTCGAC
TTACAAATGC CCGGCTCACA CGGCTATTCG ACATTGATCC ATTTACGTTC TCACTATCCT
GAGCTTCCCG TTGTGGTGAT TTCTGCCCAT GAGGATATCA ATACAATTAG CCGAGCAATC
CATTACGGCA GCAGTGGGTT TATTCCTAAA TCTGCATCGA TGGAAACGCT AAAAGAAGCG
CTGAGTGCCG TATTGTTTGG GGATATTTGG TTACCTGCTG GTGCTGAAAT CATTCCCATT
GAAGATGATG ATATCGATAA AATGGCAAGT AAACTGTCGG ATCTGACTCC ACAGCAATAT
AAAGTGCTGC AAATGTTTGC CGAAGGTTTA CTCAATAAAC AAATCGCCTA TGACTTAGGT
GTATCTGAAG CGACCATTAA GGCCCATGCC ACCGCTATCT TCAGAAAATT AGGCGTTCGT
AACCGCACTC AAGCGGTTAT TGCTCTAGCC CAGTTAGAAA TGGATAAAGT CGATTTATCT
TAA
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| Protein sequence | MKQENLNIII ADDHPLFRNA LRQALTSAFE QAKWYEADSA EALQTVLDTH DVSYDLVLLD
LQMPGSHGYS TLIHLRSHYP ELPVVVISAH EDINTISRAI HYGSSGFIPK SASMETLKEA
LSAVLFGDIW LPAGAEIIPI EDDDIDKMAS KLSDLTPQQY KVLQMFAEGL LNKQIAYDLG
VSEATIKAHA TAIFRKLGVR NRTQAVIALA QLEMDKVDLS
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