Gene Sputcn32_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2233 
SymbolmnmA 
ID5080205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2570820 
End bp2571938 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content48% 
IMG OID640499395 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_001183753 
Protein GI146293329 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.03547e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCAA TCGAACCCAC TCATACAGGA AAAAAAGTCA TTGTCGGCAT GTCCGGCGGT 
GTAGATTCAT CTGTTTCAGC CTATTTGCTT ATGCAGCAAG GCTATCAGGT TGAAGGCCTT
TTCATGAAGA ACTGGGAAGA AGATGACAAC AACGAGTACT GCGCCGCCGC TGAAGATTTA
AAAGATGCCC AAGCCGTGTG CGACAAGCTC GGGATCAAGC TACACACAGT CAACTTTGCT
GCTGAATATT GGGACAATGT ATTTGAGTAT TTCCTCGCCG AATACAAAGC GGGCCGCACG
CCAAATCCCG ATATTATGTG CAACAAAGAA ATCAAGTTTA AGGCATTTTT AGAATTTGCC
GATGAAATCC TCGACGCCGA TTACATCGCC ATGGGCCACT ATGTTCGCCG TCGCGACAAT
AGCGACGGCA GTACGCAAAT GCTCCGCGGC GTTGATGGCA ATAAAGATCA AAGTTATTTC
CTCTACACCT TAAGCCACGA GCAAGTGGCA CGTAGCCTGT TCCCTGTCGG TGAGCTTGAA
AAACATCAAG TGCGTGAAAT AGCGAAAGAA ATGGGCTTAA TCACCCATGA TAAAAAAGAC
AGCACCGGTA TCTGCTTTAT CGGTGAGCGC AAATTTACTG AATTTCTAAG GACTTATTTA
CCGGCGCAGC CTGGCAATAT CGAAACACCA GAAGGTGAAG TCATAGGCAC GCACCAAGGA
CTCATGTACC ACACCTTAGG CCAACGTAAA GGCTTAGGCA TTGGCGGCAT GAAAAACAGC
AATGACGATC CTTGGTATGT GGTCGATAAA GATCTTGAGC GTAACGTATT GATTGTGGGT
CAAGGCGGAC ACCATCCCCG TTTGATGTCG ACCGGCATGA CAGTTAACCA ACTGCATTGG
GTGGATAGAA CTGGCCCTGT CGATGGTTGT CATATCACCG TCAAAACCCG TTATCGCCAA
CAAGATGTGC CTTGCACATT AACCTACACA GATGAACACA CCTTGCGTGT GGTCTTCGAT
GAACCTGTAG CGGCGGTGAC GCCTGGACAG TCTGCGGTAT TTTATGATGG TGAAGTCTGC
CTAGGTGGCG GCATTATCGA TCAATTAATC CGAGGGTAA
 
Protein sequence
MTSIEPTHTG KKVIVGMSGG VDSSVSAYLL MQQGYQVEGL FMKNWEEDDN NEYCAAAEDL 
KDAQAVCDKL GIKLHTVNFA AEYWDNVFEY FLAEYKAGRT PNPDIMCNKE IKFKAFLEFA
DEILDADYIA MGHYVRRRDN SDGSTQMLRG VDGNKDQSYF LYTLSHEQVA RSLFPVGELE
KHQVREIAKE MGLITHDKKD STGICFIGER KFTEFLRTYL PAQPGNIETP EGEVIGTHQG
LMYHTLGQRK GLGIGGMKNS NDDPWYVVDK DLERNVLIVG QGGHHPRLMS TGMTVNQLHW
VDRTGPVDGC HITVKTRYRQ QDVPCTLTYT DEHTLRVVFD EPVAAVTPGQ SAVFYDGEVC
LGGGIIDQLI RG