Gene Sputcn32_2214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2214 
Symboltmk 
ID5080336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp2551983 
End bp2552609 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content48% 
IMG OID640499376 
Productthymidylate kinase 
Protein accessionYP_001183734 
Protein GI146293310 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTTC TTGCAAAATT TATCGTTATT GAAGGTTTAG AAGGCGCTGG TAAGTCGAGT 
GCAATTACCC TTATTCGGGA TTTTATTGAG AAGCACACTG GGCGAGCACC TATTTGTACC 
CGAGAGCCCG GAGGTACACC GCTCGCTGAA CGGATCCGTG ATTTAGTCAA AATTGCCGAT 
CCGAGCGATC CCCTCTGCGA CGAGTCTGAA TGTTTGCTTA TATATGCCGC TAGAGCGCAG 
TTGGTTGCTA ATGTAATTAA ACCTGCACTT GCGCAAGGGC AATGGGTACT TGGAGACAGA 
CACAATCTAT CATCACTGGC ATATCAAGGT GGTGGACGAG GGTTAATGCC CTTAGTGGAG 
GCGGTGAGTG CTGCAACACT AAAGGGATTT AAACCCGATC TCACCTTATA TTTAGATTTA 
GATCCTAAGC TTGGACTCAC CCGCGCGGCT AAACGTGGTG AACTCGATAG AATCGAGCAG 
CAGACCATTG ATTTCTTTGA GCGCGCCCGC GCAACTTATC TAAAGCTTGC CAGCGAAGAT 
GACAGTATTG TGGTTATCGA TGCGAGTCAA ACCATGGCTG AAGTTCATAA AGATATTTTA 
GCCGTGCTAC AGGCGATGGC ATGGTAG
 
Protein sequence
MSVLAKFIVI EGLEGAGKSS AITLIRDFIE KHTGRAPICT REPGGTPLAE RIRDLVKIAD 
PSDPLCDESE CLLIYAARAQ LVANVIKPAL AQGQWVLGDR HNLSSLAYQG GGRGLMPLVE 
AVSAATLKGF KPDLTLYLDL DPKLGLTRAA KRGELDRIEQ QTIDFFERAR ATYLKLASED 
DSIVVIDASQ TMAEVHKDIL AVLQAMAW