Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2202 |
Symbol | |
ID | 5080324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2538638 |
End bp | 2540683 |
Gene Length | 2046 bp |
Protein Length | 681 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640499364 |
Product | carboxy-terminal protease |
Protein accession | YP_001183722 |
Protein GI | 146293298 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.846279 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAAAAC TCACTTTGGC TATCTCGATT GCCACTGTTT TTGTCGGATT TTCGGCTTGG GCCGTACCAC CCACGATTCA AATCAGCGAG TTACCCACTC TCAAGCAAGA GGCACAACAT AAGGTTGCCA GTAAGAGAGT GACGGACTTA TATACTCGTT CGCATTACCA CAGATTCAAC TTAGATGATG CGTTTTCAGC GCAAATCTTC GATCGCTATC TACAACAATT AGATTATCGC CGCAATGTAT TGACCCAAGC GGATGTAGAT AGCTTTAAAC CTTATATTAA TCAATTCGAT AACATGTTGA TTTCCGGTGA GCTTGAACCT GCATACAAGA TGTTTGATGT AGTGCAAAAG CGCCGTTATG AAGGCTTTGT TTATGCCTTG TCATTATTGG ATCAAGAAAT TGATTTTACA GTTCCGGCTG ATGTGTACGA ATACGATAGG GAAGATGCTG CTTGGCCTAA GGATCAAGCT GAGATCAATG AACTGTGGCG TCAACGTGTT AAATATGATG CGTTAAATCT TAAGTTAACA GGCAAAAAGT GGCCTGAGAT CGTCGATATT TTACAAAAGC GCTATAACAA CGCGATCAAA CGTCTCACTC AAACAAACAG TGAAGATGTA TTTCAAGGTG TGATGAATGC TTTTTCCCGT AGCATAGAGC CACATACTAG CTACCTATCG CCACGCAATG CTGAGCGTTT CCAAATGGAA ATGAACCTTA GTCTTGAAGG TATTGGTGCT CAATTGCAGC TTGAAGATGA TTACACAGTG ATCAAGAGTT TGATTGCGGG CGGGCCTGCT GCTGGTAGCG AGAAGCTTTC ACCCGAAGAT AAAATTGTTG GTGTTGGTCA GGAGGGCGGC GAGATTGTCG ATGTCATTGG TTGGCGTTTA GACGATGTTG TTGACCTTAT AAAAGGGCCA AAAGGCAGTA AAGTGGTTCT GCAAATTCTA CCTAAGAAGG GTGGCTCAAA TGCAAAACCA TTCAATTTGA CCTTAGTACG TGACAAGATT CGCCTCGAAG ATCGCGCGGC AACATCAAAA GTGATTGAAC CTAAAGAAGG TGAATACGCC AATCGTAAAG TGGGTGTTAT TCAAATCCCT GGTTTCTACA TGAATTTGTC GCAAGATGTT GAAAAAGAAC TCGTTAAACT TAACGAAGCC AAAGTAGAAG GGATTGTTAT CGACTTAAGA GGAAACGGTG GTGGAGCGTT AACTGAGGCC GTATTGCTGA CAGGACTCTT TATTGATATG GGGCCTGTCG TACAAATTCG GGATGCCGAT GGCCGAGTGT CAGCACACCG TGATAATGAT GGTAAAACCA GCTATTCAGG CCCATTAACT GTGATGGTTG ATCGTTATAG CGCCTCTGCT TCTGAGATTT TCGCCGCTGC ATTACAGGAC TATGACCGAG CATTAATTGT GGGTGAATCA AGTTTTGGTA AGGGCACAGT ACAGCAACAT AAGAGTTTAG GCCGTATTTA CGATATGTAT GATAAGCCTA TTGGTCATGT GCAGTACACT ATTCAAAAAT TTTATCGTAT TAATGGCGGC AGCACCCAAA TTAAAGGGGT CACTCCTAAT ATTGCTTATC CAAGTGCATT AGAGCCAGGT GAGTATGGTG AAGCTGAAGA GAAAAACGCA TTGCCATGGG ATAAAGTTCC AGAAGCCCAA TACAATAGAT TAAGTGATGT AACGCCTGAG TTGGTTGTTA ACTTAGAGAA GAAACACCTC AACCGAATTA AAGACAGCGT AGAGTTTAAT TATATCAATC AAGATATTGC TGAATTTAAA AAGCATCACA AAGAGAAGAC CATTTCTTTA GTTGAGAGTG AACGAATTGC TTCTCGTGAA GCTGATGAGA AAAAATTGTT AGATAGAACC AATGAACGCC GTGTTGCTCA AGGTTTGGCT GTGGTTAAAT CCATGGAAGA CATTAAAGAT ACTACTGAAG CACCGGATCC ATTTTTAGAC GAAACCGCTT ATATCACCTT AGATATGATT GATGCTAAAA AGCTCGCTAA AACTAATGTG CAATAG
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Protein sequence | MRKLTLAISI ATVFVGFSAW AVPPTIQISE LPTLKQEAQH KVASKRVTDL YTRSHYHRFN LDDAFSAQIF DRYLQQLDYR RNVLTQADVD SFKPYINQFD NMLISGELEP AYKMFDVVQK RRYEGFVYAL SLLDQEIDFT VPADVYEYDR EDAAWPKDQA EINELWRQRV KYDALNLKLT GKKWPEIVDI LQKRYNNAIK RLTQTNSEDV FQGVMNAFSR SIEPHTSYLS PRNAERFQME MNLSLEGIGA QLQLEDDYTV IKSLIAGGPA AGSEKLSPED KIVGVGQEGG EIVDVIGWRL DDVVDLIKGP KGSKVVLQIL PKKGGSNAKP FNLTLVRDKI RLEDRAATSK VIEPKEGEYA NRKVGVIQIP GFYMNLSQDV EKELVKLNEA KVEGIVIDLR GNGGGALTEA VLLTGLFIDM GPVVQIRDAD GRVSAHRDND GKTSYSGPLT VMVDRYSASA SEIFAAALQD YDRALIVGES SFGKGTVQQH KSLGRIYDMY DKPIGHVQYT IQKFYRINGG STQIKGVTPN IAYPSALEPG EYGEAEEKNA LPWDKVPEAQ YNRLSDVTPE LVVNLEKKHL NRIKDSVEFN YINQDIAEFK KHHKEKTISL VESERIASRE ADEKKLLDRT NERRVAQGLA VVKSMEDIKD TTEAPDPFLD ETAYITLDMI DAKKLAKTNV Q
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