| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2175 |
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| Symbol | |
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| ID | 5080051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2502508 |
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| End bp | 2503386 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640499337 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001183695 |
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| Protein GI | 146293271 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCTCT GGGACGGCAT TTCTGAATTT GTCGCGGTGG CTGAGGCCGA AAGTTTTACC
CTAGCAGCGC AGCGGCTGAA TATCTCCACC GCCCACGTTA GCCGCCAAGT GAGCACCTTA
GAAAACCGCC TTGGCACAAA ACTGTTTTAC CGCACTACCC GCAAAGTGTC GTTAACCGAA
GAAGGCACGA TTTATTATCG TCATTGCCGC CAATTACAAA CTGGGTTAGA AGAAGCCGAG
CGCGCCATCT CAAACCTAAA GGACTCACCC CAAGGCTTAG TCAAGCTCAC GGCGCCAGTC
GCCTATGGCG AAAAATTTAT CATGCCGTTA CTCAATGATT TTATGGTGCA ATATCCCAGC
GTTGAGTTTA GCGTCGACTT GACCAATCGC ACCTTGGACT TGATTGAAGG CGGTTATGAT
CTGGCGATTC GCCTCGGAAA ACTTGCCGAT TCGAGTTTGA TGGCCAAACC GCTCAGCAAC
CGTACTCACT ATGTCGCCGC CTCACCAAGC TATGTGGAAA AATACGGTCA GCCCCATACC
TTATCTGAGC TTAACCAGCA TAATTGTTTG ATCGGTAATC ATAATTACTG GCGCTTTGTA
GAAAATGGCC GCGAACGCAA TATTAAAGTC CGCGGTAATC TCAATTGTAA CAGCGGCTAC
GCATTAAGGG ATGCGGCACT AAAAGGCATA GGGATAGTTC AACTGCCTGA TTATTATATT
GAAGAAGATA TTCAAGCCGG ACGGTTACTC TCCTTCCTTG ACACTCACCG CGAAGCCAAA
GAAGGTATTT GGGCACTCTA TCCGCAAAAT CGCCACCTGT CGGCCAAGAT CCGTGTATTG
GTCGATTACC TTGCCGAAAA ACTCGCCGAG CAGGATTAA
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| Protein sequence | MYLWDGISEF VAVAEAESFT LAAQRLNIST AHVSRQVSTL ENRLGTKLFY RTTRKVSLTE
EGTIYYRHCR QLQTGLEEAE RAISNLKDSP QGLVKLTAPV AYGEKFIMPL LNDFMVQYPS
VEFSVDLTNR TLDLIEGGYD LAIRLGKLAD SSLMAKPLSN RTHYVAASPS YVEKYGQPHT
LSELNQHNCL IGNHNYWRFV ENGRERNIKV RGNLNCNSGY ALRDAALKGI GIVQLPDYYI
EEDIQAGRLL SFLDTHREAK EGIWALYPQN RHLSAKIRVL VDYLAEKLAE QD
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