| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2171 |
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| Symbol | |
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| ID | 5080047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2497771 |
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| End bp | 2499147 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640499333 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_001183691 |
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| Protein GI | 146293267 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.633035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAGCG TATTTGATAT GTTCAAGATC GGCATTGGCC CGTCGAGCTC ACATACTGTC
GGCCCGATGA AAGCGGGCAA AATTTTTATG CAAAACCTTG CAGACTCTGG ACTCATGGCC
CAAGTGGATG AACTAAGAGC TGAACTATTT GGCTCCCTCG GCCAAACAGG CAAAGGCCAC
GGCACGGGCA AAGCAGTGAT TTTAGGCTTA ATGGGCGAAG ATCCTGAAAC CGTCGATACC
GACAGTATCG ATGGCATTTT AGAACACGTC TCCAAGGATG AAACCTTAAC GCTGCACTGT
GGCAAAGTGG TTAAATTTAC CCGTGAAAAT GGCATCATTT ACCATAGACG CAAAACGCTT
CCAGCCCACG CCAATGCCAT GACCCTATAC GCCTATAGCG AAGATAAATG CATATATGAG
CGCACTTACT ACTCAGTGGG TGGCGGCTTT ATCCTAGATG AAGATGAAAT TAGCCAACGT
AATGCCTCAC CAGCCTCACA AATTGAATCG GCACCTTTTG ATTTTGTAAG TGCGGCTCAC
TTACTGAAAT TATGTGGAGA GCAAGGTCTC AGCATTTCTT CTTTGATGAT GGCGAACGAA
CTGAGTTTAG CCTCTGAAGA GGAAGTCAAA GCCAAGCTGT GGAATATTTG GCAGACGATG
AAAACCTGTA TCGAGCGCGG TTATCAGAAG GAAGGCATTT TACCTGGTGG CCTAAAACTG
CGTCGTCGTG CTCCTGCACT GTACCGTCGT TTGAAAGCCG AAGGCCGTAA CAATGTCGAT
CCATTAACCG CTATGGATTG GGTCGATTTA TTCGCCCTGT CGGTCAACGA GCAAAATGCC
GCAGGTGATC GCGTTGTTAC CGCGCCAACA AACGGTGCTG CGGGAATTAT TCCTGCCGTT
TTATGCTATT ACGATACCTT CGTACAAGAA GTGGATATCG ATGTCTGCGC TCGTTATCTA
TTAACTGCCG CTGCGATTGG TATTTTGTAC AAGAAAAATG CCTCAATTTC GGGCGCCGAA
GTCGGTTGTC AAGGTGAAGT GGGCGTGGCC TGTTCTATGG CCGCTGGCGC TCTGACAGAG
ATCATGGGCG GTACGGTTGA GCACGTTGAA AACGCGGCTG AAATCGGCAT GGAACATAAC
TTAGGTCTAA CCTGCGATCC TGTGGGCGGC CTAGTGCAAG TGCCTTGTAT CGAACGTAAT
GCCATGGGCG CGATCAAAGC GATTAACGCT TCTCGTATGG CCCTGCGTGG CGACGGTAAC
CATAAGGTTT CACTGGATAA AGTGATCAAA ACCATGATGG ACACTGGCAA AGACATGCGC
AGTAAATATA AAGAAACCGC CAAAGGTGGT TTAGCAGTCA ACATTGTTGA GTGCTAA
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| Protein sequence | MISVFDMFKI GIGPSSSHTV GPMKAGKIFM QNLADSGLMA QVDELRAELF GSLGQTGKGH
GTGKAVILGL MGEDPETVDT DSIDGILEHV SKDETLTLHC GKVVKFTREN GIIYHRRKTL
PAHANAMTLY AYSEDKCIYE RTYYSVGGGF ILDEDEISQR NASPASQIES APFDFVSAAH
LLKLCGEQGL SISSLMMANE LSLASEEEVK AKLWNIWQTM KTCIERGYQK EGILPGGLKL
RRRAPALYRR LKAEGRNNVD PLTAMDWVDL FALSVNEQNA AGDRVVTAPT NGAAGIIPAV
LCYYDTFVQE VDIDVCARYL LTAAAIGILY KKNASISGAE VGCQGEVGVA CSMAAGALTE
IMGGTVEHVE NAAEIGMEHN LGLTCDPVGG LVQVPCIERN AMGAIKAINA SRMALRGDGN
HKVSLDKVIK TMMDTGKDMR SKYKETAKGG LAVNIVEC
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