Gene Sputcn32_2150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2150 
Symbol 
ID5080026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2466018 
End bp2466479 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content45% 
IMG OID640499312 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001183670 
Protein GI146293246 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR02010] iron-sulfur cluster assembly transcription factor IscR
[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00595476 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTA CATCTAAAGG TCGTTATGCA GTAACCGCTA TGCTGGATGT GGCCATCCAC 
TCAGCATCGG GGCCGGTTCC CTTAGCGGAT ATCTCTGAAA GACAAGGGAT TTCGCTTTCT
TATTTGGAAC AACTCTTCGC AAAGTTAAGA AAACATGGCT TAGTTGCCAG TGTTCGTGGT
CCGGGTGGTG GTTACCGTTT AGGGCTAGAA GCCAACGATA TTTCAGTGGG TATGGTTGTT
CATGCCGTAG ATGAGTCCGT TGATGCGACT CGTTGTCAAG GATTAGGCAA TTGTCAGAGT
GGAACTCGCT GCTTAACGCA CTCGCTTTGG GGTGATCTAA GCAAACAAAT TTCAGATTTT
TTAGATGGTA TCAGTCTTGC TGGCTTGATG CAGAAGCGCG ATGTGCAATT TATCTCGCTT
AAGCAAGACA CTATGCAAAA GGAACAAAGA GTCATTTTAT AG
 
Protein sequence
MKLTSKGRYA VTAMLDVAIH SASGPVPLAD ISERQGISLS YLEQLFAKLR KHGLVASVRG 
PGGGYRLGLE ANDISVGMVV HAVDESVDAT RCQGLGNCQS GTRCLTHSLW GDLSKQISDF
LDGISLAGLM QKRDVQFISL KQDTMQKEQR VIL