| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2143 |
|---|
| Symbol | |
|---|
| ID | 5080019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 2460085 |
|---|
| End bp | 2460990 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640499305 |
|---|
| Product | alpha-L-glutamate ligase |
|---|
| Protein accession | YP_001183663 |
|---|
| Protein GI | 146293239 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
|---|
| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000119851 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATCG CGATCCTATC GCAAGGGCCT GAGCTATATT CAACTAAGCG ACTCGTTGAA
GCGGCTCAAC TACGTGGTCA TGAAGTACAC GTAATTAATC CCCTTGAATG TTATATGAAT
ATCAACATGC GGCAATCGAG TATTCATATT GGTGGGAGAG AACTTCCTAC GTTTGATGCA
GTGATCCCCC GTATTGGCGC ATCGATCACC TTTTATGGTT CGGCGGTGCT GCGTCAGTTT
GAGATGATGG GGGTCTATGC TTTGAATGAT TCCGTTGGCA TCTCCCGTTC ACGTGACAAA
TTACGTTCAA TGCAGTTGAT GTCACGTCGT GGAATTGGGT TACCAATTAC AGGGTTTGCT
AATAAACCCA GTGATATTCC TGACTTAATT GATATGGTGG GTGGTGCGCC TCTTGTTATC
AAATTACTTG AAGGCACACA AGGAATTGGC GTGGTCTTAG CAGAAACCCG TAAAGCTGCC
GAGAGTGTCA TTGAAGCCTT TATGGGCCTT AAAGCCAATA TCATGGTGCA AGAATATATT
AAAGAAGCAA ATGGCGCGGA TATTCGTTGT TTTGTGCTTG GTGATAAAGT GATTGCCGCC
ATGAAGCGTC AAGCTATGCC AGGTGAGTTC CGCTCTAACT TGCACCGTGG TGGTACCGCA
AGTTTAGTTA AACTTACGCC TGAAGAGCGC TCCGTTGCTA TTCGTGCGGC TAAGACTATG
GGACTGAATG TGGCAGGTGT TGATTTGCTA CGCTCGAATC ATGGCCCCGT CATAATGGAA
GTGAATTCCT CCCCTGGGCT TGAAGGGATT GAAGGTGCCA CCACTAAAGA TGTGGCAGGT
GCGATTATTG AATTTGTTGA AAAAAATGTG ACTAAAGTGA AAAAGGTGAC TCAGGCGCAA
GGTTAA
|
|---|
| Protein sequence | MRIAILSQGP ELYSTKRLVE AAQLRGHEVH VINPLECYMN INMRQSSIHI GGRELPTFDA
VIPRIGASIT FYGSAVLRQF EMMGVYALND SVGISRSRDK LRSMQLMSRR GIGLPITGFA
NKPSDIPDLI DMVGGAPLVI KLLEGTQGIG VVLAETRKAA ESVIEAFMGL KANIMVQEYI
KEANGADIRC FVLGDKVIAA MKRQAMPGEF RSNLHRGGTA SLVKLTPEER SVAIRAAKTM
GLNVAGVDLL RSNHGPVIME VNSSPGLEGI EGATTKDVAG AIIEFVEKNV TKVKKVTQAQ
G
|
|---|
| |