| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2130 |
|---|
| Symbol | |
|---|
| ID | 5078335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 2446001 |
|---|
| End bp | 2447005 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640499292 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001183650 |
|---|
| Protein GI | 146293226 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1054] Predicted sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAG TTGTTGTGTG TGCGTTATAT AAGTTTGTGT CGTTGCCGCA TTTTGAATCT
ATCCGAGCAC CTTTGCTCGC CATGATGGAA CAGGCTGAGG TCAAAGGTAC GCTGCTACTC
GCAAGTGAAG GGATCAATGG CACGGTTGCT GGCAACCAAG AGGCTATCGA AGCCTTATTA
GCGTGGCTCA ATAATCAAAA TGGTCTAGAC AATATTGTTT ACAAGTTATC ATTCGACGAT
GAAATGCCGT TTTACCGCAC TAAAGTTAAA CTGAAAAACG AAATTGTGAC TATGGGTGTG
GAAGGGATTG ATCCACTAAA AGTGGTTGGC ACTTACGTTA AACCTAAGGA TTGGAATGCG
CTGATTTCTG ATCCTGATGT GATTTTAGTC GATACTCGTA ATGATTATGA GGTACAGATC
GGAACCTTCA AAAATGCCAT TAACCCTGTC ACTGAAACCT TTAGAGAATT CCCAGAATAC
GTAAAGCAGA ACCTTGATCC TGTCAAACAT AAAAAGGTGG CGATGTTTTG TACAGGTGGC
ATTCGTTGCG AAAAGTCAAC GGCCTATTTG AAGGAGCAAG GTTTTGAGGA GGTGTATCAT
CTTGAAGGCG GTATTCTTAA ATACTTGGAG GAAGTCAAAC AAGAAGAAAG CCTATGGGAA
GGCGAGTGCT TTGTGTTTGA TAATCGTGTT GCCGTTAACC ATGAGTTGAA GAAAGGCCAG
TACGATCAAT GCAATGCTTG CCGTATGCCG ATCACTGAAG CCGAAAAACG CAGTCCTGCC
TATGTGCAGG GTGTCAGTTG TCCTCATTGT GTCGATAAAA TTTCTGATGA GCAGCGCAAG
CGTTTTGTCG AGCGCGAACG TCAAGTTAAT CTCGCCAAGG CAAGAAACGA AGCGCATATC
GGTAGCGACG TAAATCAAGT GATTGAAGCG CGTCGAGAGA AGAAAGAAGC GCTACGTAAA
CTCGCCGCAC AAAAAAATAA ACTAAAGCAA ACTGGCACAG TTTAA
|
|---|
| Protein sequence | MTKVVVCALY KFVSLPHFES IRAPLLAMME QAEVKGTLLL ASEGINGTVA GNQEAIEALL
AWLNNQNGLD NIVYKLSFDD EMPFYRTKVK LKNEIVTMGV EGIDPLKVVG TYVKPKDWNA
LISDPDVILV DTRNDYEVQI GTFKNAINPV TETFREFPEY VKQNLDPVKH KKVAMFCTGG
IRCEKSTAYL KEQGFEEVYH LEGGILKYLE EVKQEESLWE GECFVFDNRV AVNHELKKGQ
YDQCNACRMP ITEAEKRSPA YVQGVSCPHC VDKISDEQRK RFVERERQVN LAKARNEAHI
GSDVNQVIEA RREKKEALRK LAAQKNKLKQ TGTV
|
|---|
| |