Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2104 |
Symbol | |
ID | 5078309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2412318 |
End bp | 2413874 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640499266 |
Product | hypothetical protein |
Protein accession | YP_001183624 |
Protein GI | 146293200 |
COG category | [S] Function unknown |
COG ID | [COG1322] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.607769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATTTT CTCAATCTTT TTCCGTTGCC GACATCATCG GTTTTATCGC CATCGCGTTC TTGGGTCTTT TGATTGGTGC CCTTCTCAAT CAACGTTTAA CGCGCCAGCG TTGGCAGCAG TTTAAAGACG AACTCGAACA AGAAATGCGT CAAGTCAATG AAGATGCTGA ACTCTCATTG GCACAACAAC AAATACTGGT CGATGACAAA GAAGCACAAT TACGTCAATA CCAGCAAAGA TTAGAGCAAA AAATTGAGCA ATTAGGTAAA GCCGAAGCCT TAGCCGAGCG TGTACCGAGT TTAGAGCTGC AGCTTAACGA TAGCCAGCGT CGCCAATTAG AATTGCAGTT AGCATTATCA AAATCCAATG CCATGCAGCA GACAATTCAA GCGAAGGCCG ATGCCCAGCA GGAATCCCTT CAGGAAAAAA TTGCCACCTT AGAAACCGCC GAGGTGCGTC TTAAAACCCA GTTTGAAAAT CTGGCGAATC GTATTTTTGA AGAGCGAAGC GAAAACTTTA AGCACCAAAA TGCCAGCCAG CTAGAGGGTG TCTTAGGCCC ACTAAAACAA CAGCTTGAAG GGTTTAGACA ACAAATCCGA GAATCCTACA CCCACGAACA ATCCGAGCGC AGTGCCCTTA AACATCAACT CGAACATCTA CGAGAACTTA ATTTAAAGAT GAGCCAAGAT GCCATCAATC TCACGAAAGC GCTCAAAGGG GATAACAAAC AACAGGGCAA CTGGGGAGAG GTGATACTCG ATCGTGTGCT ACAAGAAAGT GGCCTACGTG AAGGACATGA ATACCATACT CAGCAGGATT TAAAAGATGA TAATGGCAAA CGATTTAAGC CCGACGTCAT CGTCCATCTT CCCGAAAACA AAGATGTCGT AATCGATGCC AAAATGTCAC TGGTGAGTTA CGAGCGCTAT TTTAACAGTG AAGATCCCGC CCTACGCCAA CAGGCTATCA ACGAGCATGT GATCTCGATT CGTAACCATA TTAAGGGATT GAGCCAGAAG GATTATCAAC ATTTACATGG GCTTAAAAGT TTAGACTATG TGCTGATGTT TATCCCCATT GAACCTGCAT TCTTGCTCGC CTTGGAGCAC GACCCAAGTT TAGTGAATTT TGCACTAGAG CAAAATATTA TGCTGGTCAG CCCGACCAAT CTTTTAGTGG CACTGCGTAC AATCAATAAT ATTTGGCGTT ATGAATATCA AAACCAACAT GCTCAAACTA TCGCCAAGCA GGCTGGCCGC ATTTACGATA AATTATGTGG CTATATAGAA GACATGGAAA AGCTTGGTCG TGCCTTAGAT AACGCGGAAA AAACCTACCA TAGTGCAATG AACAAGCTAT CATCGGGCAA AGGTAACTTA GTTCGCCAAG CCCATTTAAT GCAGCAACTC GGTGTAGATA CCAGTAAACA ATTGGACAAA ATGTTGCTGC AAAAAGCATT GAATGAAGCG CAAGACGACA GTGACACAGA GGACGATGAG CCAACTCAAA CACTCGCCCA TGGGCCACAG GGAATTGCCG AACTGGAACC CTATTAA
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Protein sequence | MPFSQSFSVA DIIGFIAIAF LGLLIGALLN QRLTRQRWQQ FKDELEQEMR QVNEDAELSL AQQQILVDDK EAQLRQYQQR LEQKIEQLGK AEALAERVPS LELQLNDSQR RQLELQLALS KSNAMQQTIQ AKADAQQESL QEKIATLETA EVRLKTQFEN LANRIFEERS ENFKHQNASQ LEGVLGPLKQ QLEGFRQQIR ESYTHEQSER SALKHQLEHL RELNLKMSQD AINLTKALKG DNKQQGNWGE VILDRVLQES GLREGHEYHT QQDLKDDNGK RFKPDVIVHL PENKDVVIDA KMSLVSYERY FNSEDPALRQ QAINEHVISI RNHIKGLSQK DYQHLHGLKS LDYVLMFIPI EPAFLLALEH DPSLVNFALE QNIMLVSPTN LLVALRTINN IWRYEYQNQH AQTIAKQAGR IYDKLCGYIE DMEKLGRALD NAEKTYHSAM NKLSSGKGNL VRQAHLMQQL GVDTSKQLDK MLLQKALNEA QDDSDTEDDE PTQTLAHGPQ GIAELEPY
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