Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2094 |
Symbol | |
ID | 5078299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2399585 |
End bp | 2401210 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640499256 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_001183614 |
Protein GI | 146293190 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGCTA TTATCGGCTT TATTGGTATA TTTTTGCGTC AGCCTCTTAT AGTCAGTTTT ATTGTTGTCG GTCTACTCTC TGGTCCTTCC GTTTTAGATA TAGTGCATTC AAAAGAGCAA ATTAATTTAC TTTCAGAATT AGGCATTGCT GTTTTACTTT TCCTCGTGGG TATCAAGCTG GATGTAAAAC TCATCAAATC TATTGGTGGG GTTTCAATAC TCACGGGGCT TGGACAGGTT ATATTTACTT CCATTGTTGG CTATTTTATC GGATTAGCTC TTGGGTTAGA TCATATCACC AGTAGTTATA TTGCCGTTGC CCTGACCTTT TCATCGACCA TTATCATCGT CAAGCTTTTG TCCGATAAAC GAGAAATTGA CTCTCTGCAT GGACAAATAG CATTAGGTTT CTTGATCGTT CAAGATCTTG TCGTCGTGGT CGCCATGATA GTCTTAGCTG CCATCGGCAT AGGTTCTGAT GCGGGGCATA GCGGAACTCA AAATACATCG ATACTGCAAG TGACAGCATC AGGCATCGGA TTAGTGCTAT TTGTCATTGT TTTTGTTCGA TATTTAGCCA CCCCTCTCAC AGAGCAATTG GCAAAAGTAC CGGAATTACT GCTGATATAC TCAATAGCAC AAGCGACGCT ATTTGCCGCC GTCTGTGATT TATTAGGTTT AGGGATGGAA GTGGGAGGCT TACTCGCAGG GATTGCGCTT GCTTCAACCC CTTACCGCGA AAGTATTGCC GCCAGACTTG GCCCCCTGCG CGATTTTCTA TTGTTATTCT TTTTTATCGC CCTTGGTGCG ACCTTAGATT TGTCTCAACT TGGATCACAT ATCTACGCAG CCATCCTATT TTCGGTCTTC GTGTTAATAG GCAACCCTCT GATTGTATTG ATTATCATGG GATTAATGGG CTACAAAAAA AGAACCAGTT TTTTAGCTGG CCTAACCGTT GCACAAATCA GTGAATTCTC GCTCATTTTT ATTGCGATGG GGATAAGCCT AGGCCATATT CAACAAGACA TTTTGGGGTT AGTGACCTTA GTCGGCATTG TCACTATCAC GGCATCAACC TATATGATCA CCTACTCCCA TAAACTTTAC GCAATATGCG AACCGATATT GGGAATATTT GAACGAACAG GCACTCCACG TGAACAACCT TCTAAACATT CAACCCAAGA TCATTATCAA GTGGTCATCT TTGGATTAGG ACGTTTAGGG ACGGCAATTG CTGCGCGTCT AAAAGAAAAA GGCGTGAAAG TACTCGGTTT AGACTTCAAT CCATCAGCCA TAAAAAAGTG TCGCTTACTC GGTATTGATA CAGAATACGG CGATGTGACA GACGCCGAGT TTATCGCCGA ACTTCCTCTT AGACACGCCC ATTGGATTGT ATCTACTATG CCACAGCACC ATACGGGCCT GACATTAGAA GATACAAGAA AAACCATTAT ACAACTCACT CGCACAAGCG GTTTTAGCGG TAAATTAGCC ACGGTTTCTC AGAGTAAAAA AGAAACGGAA GAATTAACAA TGCTGGGTAT CGACCTCGTA TTAGAACCCT TTCAAGATGC TGCAGATAGG GCAATAGAGT TGTTACTTGA TGGTGTGGAT GTATAA
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Protein sequence | MAAIIGFIGI FLRQPLIVSF IVVGLLSGPS VLDIVHSKEQ INLLSELGIA VLLFLVGIKL DVKLIKSIGG VSILTGLGQV IFTSIVGYFI GLALGLDHIT SSYIAVALTF SSTIIIVKLL SDKREIDSLH GQIALGFLIV QDLVVVVAMI VLAAIGIGSD AGHSGTQNTS ILQVTASGIG LVLFVIVFVR YLATPLTEQL AKVPELLLIY SIAQATLFAA VCDLLGLGME VGGLLAGIAL ASTPYRESIA ARLGPLRDFL LLFFFIALGA TLDLSQLGSH IYAAILFSVF VLIGNPLIVL IIMGLMGYKK RTSFLAGLTV AQISEFSLIF IAMGISLGHI QQDILGLVTL VGIVTITAST YMITYSHKLY AICEPILGIF ERTGTPREQP SKHSTQDHYQ VVIFGLGRLG TAIAARLKEK GVKVLGLDFN PSAIKKCRLL GIDTEYGDVT DAEFIAELPL RHAHWIVSTM PQHHTGLTLE DTRKTIIQLT RTSGFSGKLA TVSQSKKETE ELTMLGIDLV LEPFQDAADR AIELLLDGVD V
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