| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2089 |
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| Symbol | |
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| ID | 5078294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2392123 |
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| End bp | 2393826 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640499251 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_001183609 |
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| Protein GI | 146293185 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGC GCGTTGTTAT CGACCCGATT ACCCGTATTG AGGGTCACTT ACGTATCGAA
GTTGAAGTTG ATGAGAATAA TGTCATCAAC AAGGCTTGGT CATCCTCTAC CCTTTGGCGT
GGTATTGAAG TCATCCTCAA GGGCCGTACG CCTATGGATG TTGGCCTTAT CGTTCAGCGG
ATTTGCGGTG TGTGTACTTA TTCCCATTAC CGTTGTGGTA CAGAAGCCGT TGAAAATGCA
CTGGGGCTCC AAATTCCACT GAACGCAAAA TACTTACGCT CCTTGATGCA AACCTCGCTC
TATATGCACG ATCATATTGT GCACTTCTAC CATTTACATG GTTTAGATTG GGTGGATATT
GTTTCTGCAT TGAGCGCCGA TCCTGCGAAA GCAGCACAGG TTGCCTTGAA GTATGCAGAT
AATCCGATTG CAGCAGGTGA AGGCGATCTG CGGGCGGTGC AAGAAAGAGT GAAAGGCTTT
GTTGAAACAG GCAAACTTGG CCCATTCGCT AACGCTTATT GGGGCAATGG CACCTATAAA
TTTACCCCTG AGCAAAACCT TATTGCCTTA TCTCACTACC TAAAAGCACT TGAAGTGCAG
CGTGTTGCCG CAGAAATGCT AGCAATATTT GGCGGTAAAT CACCTCACCC ACAATCACTG
GTTGTCGGCG GTGTCACCTC GGTTCGCGAT ATGTTAAGCC CTGCGCGTTT GCAGGAATGG
AAACAAAAAC ACGCCATCGT AACTGACTTT ATCCTACGTG CCTATCAAGC CGATATCGTG
ATGGCTGCAG AAGCCTTTGG GACAGAGCCA AGCGTTCTTG GCGGCGTGAA TGTGAAAAAT
TTCATGGCGA CTAATGACTT TGTCTTAGCT AATGGCGAAT TCATGTTTGA TCAAGGTGTG
ATCATGAATG GCGATCTTGC TGGCGTTAGT GATATCAACC CAGATCTTAT CGCCGAAGAC
GTAAGCCACG CTTGGTATAC CGCCGATGCG CCGCAACATC CCTATGACGG TACGACGATT
CCTAACTATA CGGGTTTTAT CGAACGCGAC ACTGTGTATG GCAAGCTGCC AACATTGGAT
GGTGATGGAA AATACTCTTG GGTAAAATCA CCCCGTTATC AAGGCGAACC TGTAGAAGTA
GGTCCACTGT CTTGTCTACT GGTGAGTTAT GCTCGTGGTA ATAAAGTCGT AGTGGATGCC
GTTAATGGTT TATTAGCTCG CACAGGTTTA CCCGTTGAAG CCTTATTTAC CACATTAGGC
CGCACTGCTG CCCGTATGTT ACAAACCGTG ATTGTGGCTC AAGAAGGGTT AAAAACCTTC
GAGGCTTTAC TTGTCAACAT CCAATCCGAT GAAACAACCT TCGTTAAGCC CAATATTGAC
CCCAACAAAG AATATGTAGG TCATGCCATG ATTGAGGCGC CGCGCGGAAT GTTAAGCCAC
TGGATCCGCA TCAAAAATGG GGTTGTTGAA AACTATCAAG CTGTCGTACC AACCACGTGG
AATGCAGGTC CTGTCGATGC CAACGGTAAA ATGGGTCCCT ATGAAGCTTC GCTCATTGGC
TTAAAACTGG AAGATCCAAC TAAACCCCTT GAGGTGATAC GTATTATTCA CTCATTTGAC
CCTTGCATGG CGTGTTCTGT ACACGTAATG GATTTTAAAG GTCAGGCATT GAGCGAGTTC
CGTGTCAGCC CCAATGGACA ATAA
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| Protein sequence | MSKRVVIDPI TRIEGHLRIE VEVDENNVIN KAWSSSTLWR GIEVILKGRT PMDVGLIVQR
ICGVCTYSHY RCGTEAVENA LGLQIPLNAK YLRSLMQTSL YMHDHIVHFY HLHGLDWVDI
VSALSADPAK AAQVALKYAD NPIAAGEGDL RAVQERVKGF VETGKLGPFA NAYWGNGTYK
FTPEQNLIAL SHYLKALEVQ RVAAEMLAIF GGKSPHPQSL VVGGVTSVRD MLSPARLQEW
KQKHAIVTDF ILRAYQADIV MAAEAFGTEP SVLGGVNVKN FMATNDFVLA NGEFMFDQGV
IMNGDLAGVS DINPDLIAED VSHAWYTADA PQHPYDGTTI PNYTGFIERD TVYGKLPTLD
GDGKYSWVKS PRYQGEPVEV GPLSCLLVSY ARGNKVVVDA VNGLLARTGL PVEALFTTLG
RTAARMLQTV IVAQEGLKTF EALLVNIQSD ETTFVKPNID PNKEYVGHAM IEAPRGMLSH
WIRIKNGVVE NYQAVVPTTW NAGPVDANGK MGPYEASLIG LKLEDPTKPL EVIRIIHSFD
PCMACSVHVM DFKGQALSEF RVSPNGQ
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