| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2088 |
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| Symbol | |
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| ID | 5078293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2390983 |
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| End bp | 2392119 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640499250 |
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| Product | hydrogenase (NiFe) small subunit HydA |
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| Protein accession | YP_001183608 |
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| Protein GI | 146293184 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.332576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACAC ATGCAGCCCT ATATGAACAG GGAAAAGCGC GCTTAGAGGC ACTTCGCCAG
CTCGCTCCCC GTCAACAGCA ATCCCTTGTC GAAAAAATGC AACAACATGG CATTAGTCGC
CGTGATTTTA TGAAATGGAG TGCGATGGTG ACGGGCATGC TCGCATTACC ACTTCCGTTT
AGTAACTTAG TAGCCGAAGC TGCCGAATTA GCTGACCGAG TCCCCTTAAT TTGGTTACAT
ATGGCCGAGT GTACTGGTTG TTCTGAATCT CTTGTTCGTG CCGATACACC GAACTTAGAT
TCACTGATCT TCGACCATAT TTCGCTGGAA TACCACGAGA CCTTAATGGC GGCCTCTGGT
TGGCAAGCAG AAGAAAATCT CGAACATGCG CTAGAAGCCT ACAAGGGTCG CTACTTGCTG
GCTGTTGAGG GTGCCATTCC TACCGCCAAT AATGGCAGTT TCTTAACTGT GGGTTGTAAA
GGCCACACAG GTTTAGAGAT TATCAAGCAT GCTGCTGAAG GTGCTGCAGC CATTATTTCG
GTCGGCACTT GCGCCGCATT TGGTGGCGTT CAAGCCGCAT ATCCTAACCC CACTGGCGCC
AAAGGTGTCC ATGAGGTCGT GAGTAAACCT GTTATTAATT TAGGCGGTTG TCCACCGAGT
GAAAAAAATA TTGTGGGTAC ATTGATGTAC TTCATTATGT TTGGAAGATT ACCCGCACTG
GATATGTTTA ATCGTCCAAA GTGGGCTTAT GGTGCTCGAG TACATGATAA CTGCGAACGT
CGTGGCCGTT TCGATGCAGG TGAATTCGTT GAAGAATTTG GCGATCACGG TGCGAAAGAA
GGTTATTGCC TTTATAAGGT GGGTTGTAAA GGTCCTTACA CTTACAACAA CTGCCCAACT
GAACGCTTTA ACCATCACAC TAGCTGGCCA GTACTCGCTG GACACGGTTG TATGGGCTGC
TCAGAACCTA ACTTCTGGGA TGATATGGCT GACTTTGAAA AACCCCTTGG CCGTCAACTC
CTCCATGGAT TGGATGCGAC CGCAGATACT ATTGGTGCGG TAATTTTAGG CGCGACTGTG
GTGGGCATTG GAGCCCATGC TGTTGCCAGT ATTTTTGCCA AACCGCTGGA GGAATAA
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| Protein sequence | MDTHAALYEQ GKARLEALRQ LAPRQQQSLV EKMQQHGISR RDFMKWSAMV TGMLALPLPF
SNLVAEAAEL ADRVPLIWLH MAECTGCSES LVRADTPNLD SLIFDHISLE YHETLMAASG
WQAEENLEHA LEAYKGRYLL AVEGAIPTAN NGSFLTVGCK GHTGLEIIKH AAEGAAAIIS
VGTCAAFGGV QAAYPNPTGA KGVHEVVSKP VINLGGCPPS EKNIVGTLMY FIMFGRLPAL
DMFNRPKWAY GARVHDNCER RGRFDAGEFV EEFGDHGAKE GYCLYKVGCK GPYTYNNCPT
ERFNHHTSWP VLAGHGCMGC SEPNFWDDMA DFEKPLGRQL LHGLDATADT IGAVILGATV
VGIGAHAVAS IFAKPLEE
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