| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2084 |
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| Symbol | |
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| ID | 5078289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2387465 |
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| End bp | 2388292 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640499246 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_001183604 |
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| Protein GI | 146293180 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.107249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGCC CCTGTGAGCT GCTGATTGCC TGTGACCAGT TCGATATTGC TGATCATATG
CTCAGTATGG CGGTGGCAGA GGTTCAACGA ATAGAGCAAA AGTATAGCCG TTTTATTGCA
CACAATATGC TCTGGAATGT GAATCATGCC CAAGGCCAAA AACAATCAAT TGATGAAGAA
ACTTGGCAAT TATTGCAATT TGCTCAGCAG TGTTTTCAGT TAAGTGAGGG ATTATTTGAT
ATTTCGGCAG GGCCTTTAAT GGCACTTTGG CGATTCGAAC CTAACACACC ATTGCCTGCC
CATATTGATA TTCTGAGAAT GAAAGCGTTT GTGGGATTTG AGCGTATAGA CTTCACCTCA
CAATATTTAG TTATGCCAGC AGGAATGCAG TTAGATTTTG GAGGGATAGC AAAAGAATAC
GCAGTCGACA GCGTCGCCTA TCAGCTCGCG GAGTCTTATC CCACTATTGC AGTATTAGTC
AATTTTGGGG GGGATATTGC CTGCCCAATT GCAAAAGCGA CACCGTGGCA AGTGGGCATT
GAAGATCCAC AACATCTTGA TCATGCAGCT AAAGTACTTT CAATAAGGCA TGGCGCACTC
GCAACCAGTG GTGATACCCG CCGATTTATT GAAGTAGCAG GAAAGCGTTA CGGACATATT
ATCGATCCGC GAACGGGATA TCCTGTGGTG TGCGCGCCAC GTTCAGTGAC TGTGTTGGGA
CCTAATTGTG TTACGGCTGG AATGCTTGCA ACAATGGCGA TGTTGCAAGG CGCTGATGCT
GAATATTTTT TATCACAACA ATCTGTTAAA TATAGTATTT TTAGATAG
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| Protein sequence | MASPCELLIA CDQFDIADHM LSMAVAEVQR IEQKYSRFIA HNMLWNVNHA QGQKQSIDEE
TWQLLQFAQQ CFQLSEGLFD ISAGPLMALW RFEPNTPLPA HIDILRMKAF VGFERIDFTS
QYLVMPAGMQ LDFGGIAKEY AVDSVAYQLA ESYPTIAVLV NFGGDIACPI AKATPWQVGI
EDPQHLDHAA KVLSIRHGAL ATSGDTRRFI EVAGKRYGHI IDPRTGYPVV CAPRSVTVLG
PNCVTAGMLA TMAMLQGADA EYFLSQQSVK YSIFR
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