Gene Sputcn32_2067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2067 
SymbolaraD 
ID5079493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2362240 
End bp2362935 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content45% 
IMG OID640499229 
ProductL-ribulose-5-phosphate 4-epimerase 
Protein accessionYP_001183587 
Protein GI146293163 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID[TIGR00760] L-ribulose-5-phosphate 4-epimerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000421715 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTTA TAGAACTTAA ACGCGAAGTT TATGAAGCCA ATATGGAGCT CGAAAAGCGT 
CATTTAGTGA CCTATACCTT TGGCAATGTG TCACAAATTG ATCGCAAGCG TGGTGTCATC
GGTATTAAGC CCAGCGGCGT ACCCTACGAA GATCTTAAGG TTGAAGATAT CGTTATCGTC
GATCTTGAAA ACCACATCGT CGAGGGGCGT TTACGTCCAT CATCTGACAC TAAAACCCAC
ACTTACTTGT ATCGCCAGTG GGAAAGTATT GGGGGCATTA CCCATACGCA TTCCACCTAT
GCCACCGCAT GGGCACAGGC GCAAATTGCA ATCCCTTGTT TTGGTACCAC TCAAGCCGAT
TATGTTTACG GCGAGATCCC CTGTACAGCT GTGATGCGTG ATGACCAAAT TAGTCGCGAC
TACGAAGAAG AAACCGGTGT ACAGATTCTC GATTGTTTTG CTGATAGAAA CCCGAGTGAG
TCACCTATGG TCATTGTGGC AGGGCATGCA CCATTTACGT GGGGAGACAG TGCCGCCAAA
TCTGTTTACC ACGCCGTTCT GCTTGAAGAA ATTGCCAGAA TGGCATACCT CACTAAGACA
TTGTCACCGA ATATAGCATC ATTAAAACAA GAACTTATAG ATAAGCACTA TCTGCGTAAG
CACGGCAAAG ATGCTTACTA TGGTCAAGAC AAATAA
 
Protein sequence
MSFIELKREV YEANMELEKR HLVTYTFGNV SQIDRKRGVI GIKPSGVPYE DLKVEDIVIV 
DLENHIVEGR LRPSSDTKTH TYLYRQWESI GGITHTHSTY ATAWAQAQIA IPCFGTTQAD
YVYGEIPCTA VMRDDQISRD YEEETGVQIL DCFADRNPSE SPMVIVAGHA PFTWGDSAAK
SVYHAVLLEE IARMAYLTKT LSPNIASLKQ ELIDKHYLRK HGKDAYYGQD K