Gene Sputcn32_2055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2055 
Symbol 
ID5079481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp2348364 
End bp2349473 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content46% 
IMG OID640499217 
ProductAlpha-N-arabinofuranosidase 
Protein accessionYP_001183575 
Protein GI146293151 
COG category[R] General function prediction only 
COG ID[COG3940] Predicted beta-xylosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGCAA AGCTAATCAT GGATAATATA ATCTCGAAAA CTAACGCAAA ATTAGGTCTG 
TTATCAGCCT TTATTACCTC GATGCTGTTG CCTGTGTGTG CAGCGAGTTC CTCGCCCGTT 
CTAGCGCTTC CAGCTTCTCA AACTAGCGTG ACGTCAAGTG CAGTTCAATA TGCCCCTTTT 
ATTGAGCGCC GCGCGGATCC TTGGGTTATA AAAGATGATG ATGGGAGCTA TTACTTTATC 
GCATCTGTAC CCGAGTTTGA TCGGATAGAG CTTCGTCATG CCGCAAATAT TAAAGGATTA 
AGTCAAGCTA TCCCCAAAAT TATTTGGCGT AAGCATACAT CAGGGCCAAT GAGTATCGAC 
ATTTGGGCGC CAGAACTGCA TAAAATTGAT GGTCGCTGGT ATATCTATTA TGCTGCCAGT 
GATAAAGACA GACGCTTTCA TAACCGCATG TTTGTATTGG GGCTTGAAGG TGACAACCCC 
ATGAAGGGCG ATTGGCAAGA GCTTGGCCGT TTAAAAACCG CAAGGGATGG ATTTTCCTTA 
GATGCCACCC ACTTTAGTGT TGGCGGGCAG GGCTATTTTA TTTGGGCGCA GCAGGACGAT 
GCCAAAAGCT ACAATACGGG ACTGGTGATT GCCAAAATGC TGTCACCTAC AGCGGCATCA 
CCACAAGAAG CAATCATCAG TGAGCCTTTG CTGGATTGGG AAAGGCAAGG CTTTAAAGTT 
AATGAAGGCG CTGCGGTATT GGTGAAAAAT GGGAAGGTAT TTGTCACTTA TTCTGCCAGT 
GCAACAGATG ATCGTTATGC GATGGGACTC CTTTGGGCGG AGCAAGATGC AGATCTGCTC 
GACCCCAAAA ATTGGCATAA AGTTTCTGAG CCTGTTTTTA GCACAGAGCC TACACTTAAT 
CGCTTTGGTC CTGGACATAA CAGCTTTGTG CTTGCCGAAG ATGGTCAAAC CGAGTTGATG 
TTTTACCATG CTCGCAATTA CCTTGAACTT CAAGGCACGC CATTAACCGA TGGTAATCGC 
CATACTTACT ACCGCGCTAT CTCATGGACA GAGAATGGAT TCCCTGTATT TCACAATCAG 
CTGGCAGATA ATGTGGTCGA TATAAAATAA
 
Protein sequence
MDAKLIMDNI ISKTNAKLGL LSAFITSMLL PVCAASSSPV LALPASQTSV TSSAVQYAPF 
IERRADPWVI KDDDGSYYFI ASVPEFDRIE LRHAANIKGL SQAIPKIIWR KHTSGPMSID 
IWAPELHKID GRWYIYYAAS DKDRRFHNRM FVLGLEGDNP MKGDWQELGR LKTARDGFSL 
DATHFSVGGQ GYFIWAQQDD AKSYNTGLVI AKMLSPTAAS PQEAIISEPL LDWERQGFKV 
NEGAAVLVKN GKVFVTYSAS ATDDRYAMGL LWAEQDADLL DPKNWHKVSE PVFSTEPTLN 
RFGPGHNSFV LAEDGQTELM FYHARNYLEL QGTPLTDGNR HTYYRAISWT ENGFPVFHNQ 
LADNVVDIK