Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2052 |
Symbol | |
ID | 5079478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2344074 |
End bp | 2345489 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640499214 |
Product | sugar (glycoside-Pentoside-hexuronide) transporter |
Protein accession | YP_001183572 |
Protein GI | 146293148 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTCTC ATAAAATGTC GGTCATTGAA AAGATCGGTT ACGGCTCAGG GGATATGGCC GTCAACGTCG TGATATCTTC AATGATGTTA ATTATTACCT TCTTTTATAC GGATATTTTT GGCCTAAAGC CCGCCGATGT GGGCATTTTA TTTCTACTCG TTCGATTAAT CGATGCCATC ACGGATCCCT TAATGGGCAT CATTAATGAT AAAGTCACCA CGCGCTGGGG GCGTTACCGT CCCTACTTCT TATTTATGGC AATCCCCTTC GGGCTTTCGG TATTTTTAAC CTTCAGCACG CCGGATTGGG ACTATAACGC CAAACTCATT TGGGCTTATT CGACTTATAT TCTTGTGACC ATCATTTTTA CCACGGTCAC TATTCCCTAT ATTTCCATTA TTAGTGTACT GACGGATAAT CCAAAGGAGC GCTTATCCGC TAACGGTTAT CGGTTATTCT TCGCCAAAAT TGCCGCCTTT TTAGTGACTA TTATTGTCCC TATATTAGCT TCCTCTTGGG GAGGAGATGA TATTGCTGCA GGTTATCAAA AGGCCATGGG AGTGATGGCG TTAATGGCAA CACTGCTGTT TTTATTCTGT TTTTTCACTA CAACTGAACG TGTAGCCTAT AAGGTTGAAA CTAAACCTAT TTCAATGCAA ATACGTCTAT TGTTAAAAAA TGATCAGTGG CTCATTTTGA CCGCTATTTG TGTCATTGGC ACTATTGGTT ATGTGATCCG CGGTTCGGTT GCCGCCTATT ACGCCACCTA CTTCCTTGGT GGTGATGCCA AAATGCTTTC GGCCTTTTTA TCAACAGGAG TGGGTGCGGC AATCCTTGCG ATGGTCGCCT CAACTTGGAT CACTAAGCGC TTTTGTAAAC TCAAATTATT CCGTTACAGC CAAATTGCTG TAGGGGTTTT GAGCGTGGTG ATGTTTTTTG CCGTTCAACC CGGAGACATA GTGTTAGCCT TTGTGCTCTA TTTTGCGATT TCTTTTGTGG TTGATTTGCA CGCTCCAGTT TTCTGGTCAG TGATTTCAGA ATCCGTCGAT TACGGAACCG TCAAAACGGG TCATAGGGTA TCAGGCCTTG CATTTGGGGG GATATCCTTT GCACAAAAAG CGGGAATGGG AGCGGCAGGT TTTGTAGTTG GCATGTTATT GACCTACTTT AATTATCAAC CGGGACAAGA ACAAACGTCT ACGACGCTCA TAGGCATTTC ACTGATGCTA ACCATCATAC CTGGCGCGTT CCATACCTTG ATGGGCTTAT TGATGTTCAA ATACAAGATA TCGGACCGTG TCTATGAGGA CATTAAGCTG TCACTGCCCG ATATGGAAGT AATTGATGGG AAAAGTACGC CAGAGACACA GCCTAATGTC CACAAGGATA GTACCCAAAC CCAAGTTTCT ATATAG
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Protein sequence | MSSHKMSVIE KIGYGSGDMA VNVVISSMML IITFFYTDIF GLKPADVGIL FLLVRLIDAI TDPLMGIIND KVTTRWGRYR PYFLFMAIPF GLSVFLTFST PDWDYNAKLI WAYSTYILVT IIFTTVTIPY ISIISVLTDN PKERLSANGY RLFFAKIAAF LVTIIVPILA SSWGGDDIAA GYQKAMGVMA LMATLLFLFC FFTTTERVAY KVETKPISMQ IRLLLKNDQW LILTAICVIG TIGYVIRGSV AAYYATYFLG GDAKMLSAFL STGVGAAILA MVASTWITKR FCKLKLFRYS QIAVGVLSVV MFFAVQPGDI VLAFVLYFAI SFVVDLHAPV FWSVISESVD YGTVKTGHRV SGLAFGGISF AQKAGMGAAG FVVGMLLTYF NYQPGQEQTS TTLIGISLML TIIPGAFHTL MGLLMFKYKI SDRVYEDIKL SLPDMEVIDG KSTPETQPNV HKDSTQTQVS I
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