| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2025 |
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| Symbol | |
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| ID | 5078230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2307672 |
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| End bp | 2309651 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640499187 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001183545 |
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| Protein GI | 146293121 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.256994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCACT CAACCCCAGA AAAGCCTCTT GCAGATAAGG CTGACAGTTA TAGCACTTTA
TTGCAGCAAC AATTTGGTTT TTCAGCCTTT AGGAATGGTC AATACCAAAC GATTTCGCAG
CTATTAGCAG GACAATCTAG CCTCGCCATT TTTCCGACTG GATCAGGTAA GTCCTTGTGT
TATCAATTTA CTGCCTTACA GTTGCCCCAT TTGACCTTAG TGATATCCCC CTTGCTGGCA
TTAATGAAGG ATCAACTTGA GTTTTTGCAA ACCAAGGGAA TTGCAGCGGC AAGCATAGAC
TCAACTCTCA ATGCTGAGCA GACTAAGCAA GTTATGATCG ACGCGCGGTC GGGCAAGCTA
AAGATTTTGA TGGTATCGGT TGAGCGTTTT AAAAATGAAC GCTTTAGGCA GTTTATCCAG
TCGGTTGCCA TTTCAATGCT GGTTATTGAT GAGGCGCACT GTATTTCAGA ATGGGGACAT
AATTTCCGAC CGGATTACTT AAAGTTACCC GATTATCGAC GGGAGCTTGG GATCCCACTA
GTGCTACTTT TAACGGCAAC CGCAACCCGT AAGGTGAAGT TGGATATGGC GGCGCGGTTT
GATATCGCTC CTAAACACAT AGTTCAAACA GGATTCTATC GCCCCAATTT AGATTTATGT
GTTATCCCTG TATTAAGCCA AGAAAAAAAT GCATTACTGT ATAGGCAAGT CCGCCAATAT
GCAGGAGCGG GTATTGTCTA TGTCACTCTT CAACATACGG CAGAACAAGT TGCGGATTTG
CTCACACAAG AAGGGATCCT TGCTCGTGCT TATCATGCAG GCTTTGACGA TGTAAAACGC
CAGCAAGTTC AACATGATTT TATGCAGGAT AAAGTGCAAG TGGTGGTCGC GACGATTGCT
TTTGGTATGG GGATAGATAA AAGCAATATT CGTTTTGTTA TCCATTATGA CTTACCTAAA
TCCATTGAGA ATTACAGTCA AGAAATTGGG CGAGCGGGTC GAGACGGTCA ACACTCGCAC
TGCGTGACCT TGGCTAATCT TGATGGAATG AATACAGTCG AAAATTTTGT TTATGGTGAC
ACGCCAGAAC GAAGCGGTAT TGAGCTCATT ATTGAAAATA TCAAGCAAGA ACAACATCAA
GGACGTTGGG AACATCAGTT AAATACGTTA TCTAGCATCA GTAATATCCG TCAGTTACCA
TTAAAAACAC TGTTAGTTCA GTTAGAAATA CAAGGCGTAA TTAAACCGCT TTATGCTTAC
TATGCTGATG TGACCTATCG CTTCATCAAA GATAAATCAG AAATTTTAAG TGCATTTAAT
CCAGAGCGGC AGGCATTCTT ATCGCAAATT TTTACTCACA CACACATGAA GCGGGTTTGG
GGTGTTTTAG ATGTTGATGC ACTTTACAGT GCAACGGGAG CTGAACGCAG TAAAGTATTA
ACAGCACTGG AATATCTGGC AGATAAACAA TGGATTGAAC TAGAAACTAA AAAAATTACC
GATGTTTATC AAGTGAATAA TACAATATTG GCTCAGATCT CCCTTGTAGA CAATCTTCAC
CAATACTTTG TGGAAAAAGA GCATAAAGAA ATTTTACGTA TTGGACAATT AGTGCGTTTT
TTCGAATTAG ATACGTGTCT GAGCTACAAT TTATCTCGCT ATTTTGATGA CCAAAACACA
CCACAATATT GCGGCCATTG CAGTGTTTGC CGCGGAAATG TGGCTAAGTT AACGTATTCT
GCAGATCCTG TTTGGCCTGA TGAGTCGCAA ATCCGTACCG ATTTATTCGA ACTACAAACC
CACGTAAAAA TGAAAGGTAT ACTTTCGTTG TCACTCGATA CTCAATGCCG ATTTCTAGCT
GGCATGATGG TTCCTCTTTT TAGTCGACTA CAGATCCGTA AACTCAAGGG ATTTGGTCGT
TGTGAAAAAT TAAGATATGC AGAAATAAAA CAGAAAGTTA CGTCACTACT GGCGGGCTAG
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| Protein sequence | MFHSTPEKPL ADKADSYSTL LQQQFGFSAF RNGQYQTISQ LLAGQSSLAI FPTGSGKSLC
YQFTALQLPH LTLVISPLLA LMKDQLEFLQ TKGIAAASID STLNAEQTKQ VMIDARSGKL
KILMVSVERF KNERFRQFIQ SVAISMLVID EAHCISEWGH NFRPDYLKLP DYRRELGIPL
VLLLTATATR KVKLDMAARF DIAPKHIVQT GFYRPNLDLC VIPVLSQEKN ALLYRQVRQY
AGAGIVYVTL QHTAEQVADL LTQEGILARA YHAGFDDVKR QQVQHDFMQD KVQVVVATIA
FGMGIDKSNI RFVIHYDLPK SIENYSQEIG RAGRDGQHSH CVTLANLDGM NTVENFVYGD
TPERSGIELI IENIKQEQHQ GRWEHQLNTL SSISNIRQLP LKTLLVQLEI QGVIKPLYAY
YADVTYRFIK DKSEILSAFN PERQAFLSQI FTHTHMKRVW GVLDVDALYS ATGAERSKVL
TALEYLADKQ WIELETKKIT DVYQVNNTIL AQISLVDNLH QYFVEKEHKE ILRIGQLVRF
FELDTCLSYN LSRYFDDQNT PQYCGHCSVC RGNVAKLTYS ADPVWPDESQ IRTDLFELQT
HVKMKGILSL SLDTQCRFLA GMMVPLFSRL QIRKLKGFGR CEKLRYAEIK QKVTSLLAG
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