| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2021 |
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| Symbol | |
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| ID | 5078224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2304378 |
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| End bp | 2305757 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640499181 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001183541 |
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| Protein GI | 146293117 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.068877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACATT CAGGCTTCCA AGCCAAACGC TTAATCCAAC TTGCACTGCC AGTGTTCATC
GCCCAAGTCA CCCAGACAAT GATGGGATTT ATCGATACTG TTATGGCGGG ACGAGTCAGT
GCCGTTGATA TGGCGGCTGT GGCCGTAGGA ACCAGCCTTT GGCTGCCCGC TATTTTATTT
GTTCAAGGTT TACTGATGGC TTTTACCCCC TTATTTGCCC ATTTTAATGG TGCAAATAAT
CAAAAAGCGA TTCAACCTTT AGCCTTTCAA GGGGCCTATC TTGCCATCAT TGGCGGCATT
GGGGTGATGA TTTTCCTCGC ATCGGCACCT TTTGTACTTG GCCATATGGA CTTAGAACCT
GAATTGTACC GCTTAACCAT AGGTTATATC GACGGTATTT TATGGGGCGC ACCGGCATTT
GTGTTATATC AAGTATTAAG AGGCTGTAGC GAAGGGATCT CATACACTTT ACCGACAATG
GTTATTGGGT TTGTCGGATT AGCCGTCAAT ATCCCTGCCA ATTACATTTT TATTTATGGT
CACTTTGGCG TTCCTGCAAT GGGCGGTGCG GGTTGCGGGG TTGCAACGGC CTTGGTTTTT
TGGGCAATGC TGATTGCAAT GACTATTTAT ATGCAATTTC ACCGCAAATT TGCCGCACTT
GCTCCTTTCA GTAAATTTCA TCGACCAGAG TTTAAAACGA TGAAAAAAAT GACGAAGCTC
GGCATGCCAA TAGCTATGGC GCTGTTTTTT GAAGTGAGTT TATTTGCAAT CATTGCATTG
CTTCTGGCGC CTTTAGGTGC CACTGTTGTA GCTAGTCACC AAATTGCCCT CAACTTCTCC
GCAATTGTTT TTATGCTGCC TTTATCTATT GGTATCGCAG TTTCGATCAG AATTGGTTAT
TACTTAGGCC GAGATCGTAG CGATATTTCT GCCGTTGTGG CAAAAGTGGG GTTATGGCTA
GCGCTGTCTC TCGCTCTTTC CACTGCGGTG TTAACGGTAC TATTTAGATT CCAGATTGCT
GAACTCTATA ACAATGACCC GGATGTCGTT GTGTTAGCTG GTAGTTTGAT GTTGATGGCC
GCGCTATATC AATTATCGGA TTCAGTCCAA GTTGTTGCGG CGGGCGCCCT ACGGGGCTAT
AAAGATACTC GTAGTGCTTT TTATATCACG CTCTTCTCCT ACTGGGGGAT TGGCATGACA
CTAGGCTATA CCTTGGCTTA TACGGATTAT ATTGTGCCAG CTATGGGCGC CCACGGATTT
TGGACTGGAC TTATCGCAGG ACTGACCTCG GCAGCGCTGC TGTTTTTTAT ACGCTTACGC
TATATCCAAA AGCATGGAGT ACATTTAAGC CTTATTGAAG GTGATAGCGC ACACCATTAA
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| Protein sequence | MKHSGFQAKR LIQLALPVFI AQVTQTMMGF IDTVMAGRVS AVDMAAVAVG TSLWLPAILF
VQGLLMAFTP LFAHFNGANN QKAIQPLAFQ GAYLAIIGGI GVMIFLASAP FVLGHMDLEP
ELYRLTIGYI DGILWGAPAF VLYQVLRGCS EGISYTLPTM VIGFVGLAVN IPANYIFIYG
HFGVPAMGGA GCGVATALVF WAMLIAMTIY MQFHRKFAAL APFSKFHRPE FKTMKKMTKL
GMPIAMALFF EVSLFAIIAL LLAPLGATVV ASHQIALNFS AIVFMLPLSI GIAVSIRIGY
YLGRDRSDIS AVVAKVGLWL ALSLALSTAV LTVLFRFQIA ELYNNDPDVV VLAGSLMLMA
ALYQLSDSVQ VVAAGALRGY KDTRSAFYIT LFSYWGIGMT LGYTLAYTDY IVPAMGAHGF
WTGLIAGLTS AALLFFIRLR YIQKHGVHLS LIEGDSAHH
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