Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2017 |
Symbol | infC |
ID | 5078220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2300642 |
End bp | 2301073 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640499177 |
Product | translation initiation factor IF-3 |
Protein accession | YP_001183537 |
Protein GI | 146293113 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000520064 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTAAGCA TCAGAGATGC TCAGAATTTG GCAGATGAAG CAGGTGTAGA CCTAGTAGAA ATCAGCCCAA ATGCTGAACC TCCAGTATGT CGCATTATGG ACTACGGTAA GTTCCTATTT GATAAAGCGA AAGCGCAAAA GGAACAAAAG AAGAAGCAAA AGCAGGTTCA GGTTAAGGAA ATTAAATTCC GTCCTGGAAC TGACGAAAAC GACTATCAGG TAAAACTACG CAACCTGATA CGTTTTCTGG AAGACGGGGA CAAAGCGAAG ATTACGCTGC GTTTCCGAGG TCGCGAAATG GCCCACCAAA ACCTAGGTAT GGATCTTCTG AACCGTATCA AGGCTGATTT GGACGAGTAT GCGGTTGTTG AATCTTTCCC TAAAATGGAA GGTCGACAAG CAATTATGGT GCTAGCGCCT AAAAAGAAAT AA
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Protein sequence | MVSIRDAQNL ADEAGVDLVE ISPNAEPPVC RIMDYGKFLF DKAKAQKEQK KKQKQVQVKE IKFRPGTDEN DYQVKLRNLI RFLEDGDKAK ITLRFRGREM AHQNLGMDLL NRIKADLDEY AVVESFPKME GRQAIMVLAP KKK
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