Gene Sputcn32_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2017 
SymbolinfC 
ID5078220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2300642 
End bp2301073 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content44% 
IMG OID640499177 
Producttranslation initiation factor IF-3 
Protein accessionYP_001183537 
Protein GI146293113 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000520064 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTAAGCA TCAGAGATGC TCAGAATTTG GCAGATGAAG CAGGTGTAGA CCTAGTAGAA 
ATCAGCCCAA ATGCTGAACC TCCAGTATGT CGCATTATGG ACTACGGTAA GTTCCTATTT
GATAAAGCGA AAGCGCAAAA GGAACAAAAG AAGAAGCAAA AGCAGGTTCA GGTTAAGGAA
ATTAAATTCC GTCCTGGAAC TGACGAAAAC GACTATCAGG TAAAACTACG CAACCTGATA
CGTTTTCTGG AAGACGGGGA CAAAGCGAAG ATTACGCTGC GTTTCCGAGG TCGCGAAATG
GCCCACCAAA ACCTAGGTAT GGATCTTCTG AACCGTATCA AGGCTGATTT GGACGAGTAT
GCGGTTGTTG AATCTTTCCC TAAAATGGAA GGTCGACAAG CAATTATGGT GCTAGCGCCT
AAAAAGAAAT AA
 
Protein sequence
MVSIRDAQNL ADEAGVDLVE ISPNAEPPVC RIMDYGKFLF DKAKAQKEQK KKQKQVQVKE 
IKFRPGTDEN DYQVKLRNLI RFLEDGDKAK ITLRFRGREM AHQNLGMDLL NRIKADLDEY
AVVESFPKME GRQAIMVLAP KKK