Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2001 |
Symbol | |
ID | 5078204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2287659 |
End bp | 2288318 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640499161 |
Product | hypothetical protein |
Protein accession | YP_001183521 |
Protein GI | 146293097 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000304908 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCAAG AAACACTGTA CTCGACGAGT ACGTCAACAT TGGAAGTGAA CAAACTTCTT AAAAACACTT ATATGCTGTT ATCGATGACG CTCGCTTTTT CTGCACTATG TGCAGGGTTG GCAATGATGC TCAATATCAG CCCATTAATG TCAATTGGCT TGTCAATTGG TGGTCTAGTG CTACTGTTTG TGACATTACG TAAAGCTGAA TCTGCTGCGG GTATTTTCTG GATTTTTGCT TTTACAGGTA TGGAAGGTGC ATCACTGGGC TATATGCTAA ATCACTATGC AGGTATGGCA AGTGGTCCAC AGCTGATCAT GCAAGCACTA GGTTTAACCT CAGTCATTTT TGTTGCCTTA TCAGCTTATG CGTTAACCAC TAAGAAAGAT TTTTCATTTT TACGAGGTTT TCTGTTTGCA GGTTTGATTG TTGTCATTGC TGCTGCGGTG ATTAATATTT TTGTGGGCAA CAGTGTCGCC TTTATGGCCA TTAACGCAGG GCTTGCGCTG TTAATGACGG GGTTTATCCT GTTTGATACT AGCCGTATCG TTAATGGTGG TGAAACCAAT TATATTCGTG CAACTATCTC CTTATACTTA GATTTTTTAA ACCTATTTAT TGCTATTTTG CACCTGATGG GCATCGGCAA CGATGACTGA
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Protein sequence | MTQETLYSTS TSTLEVNKLL KNTYMLLSMT LAFSALCAGL AMMLNISPLM SIGLSIGGLV LLFVTLRKAE SAAGIFWIFA FTGMEGASLG YMLNHYAGMA SGPQLIMQAL GLTSVIFVAL SAYALTTKKD FSFLRGFLFA GLIVVIAAAV INIFVGNSVA FMAINAGLAL LMTGFILFDT SRIVNGGETN YIRATISLYL DFLNLFIAIL HLMGIGNDD
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