| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1966 |
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| Symbol | |
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| ID | 5078414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2250873 |
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| End bp | 2252921 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640499126 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001183487 |
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| Protein GI | 146293063 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACATA CACACGAATA TGATGAACAG GGCAAACAAC TATGTTGCAC AGAAGAAGAA
AAAATAAATA ACAAAGCAGA TGTGCTAATA AAAAATAGCC CTTCGAAAAG CTGTTGTTGT
GCCAGTGACG ATCAAGATCA GCATGTCGAT GATGATAGCC ATGACCACGA TCATGCCAGT
GATGGCGGTA GCAATATAAA GCTATTTCTG CCTGCCGCAA TGAGTTTGGT TGCACTGCTC
ATTGCGATAG TACTGGATAA TTATTTTCCA CAAACCTGGT TTACTGGCTG GTTGCGTATT
GGCTGGTACG TTGCCGCCTA TTTACCTGTA GGCCTGCCAG TGTTGAAAGA GGCGGTCGAA
AGCATCACCA AGGGTGAAGT ATTTTCCGAA TTTTTCTTGA TGAGTATTGC AACTATTGGA
GCGTTTGCTA TTGGTGAATA CCCGGAAGGT GTTGCCGTTA TGTTGTTTTA TTCTGTAGGG
GAAGTATTCC AGACGCTCGC CGTCAAAAGG GCAAAGCTTA ATATCAAAAC ATTACTCGAT
CAGCGTCCCG ACGAAGTAAC AGTGTTACGA AATAACCAAG CAACTACTCT CAAGGCTGAA
ACAGTCAGTA TTGGCGACAT TATTCAGCTC AAGGCAGGTG AAAAATTGGG CCTGGATGGT
GAACTCTTAA CTGAATCGGC ATCATTCAAC ACCGCCGCAT TGACCGGTGA AAGCAAACCC
GACACTAAAA CAAAAGGCGA AACTGTTCTA GCGGGTATGA TTAATCTTAA TGTGGTATCA
CAAGTCAAAG TAACCGCAGC CTATACCGAC AGTAAACTGT CCAGAATTTT AGAATTGGTG
CAAAACGCCT CTGCACAAAA AGCCCCCACT GAATTGTTCA TCCGCAAATT CGCCAAAATA
TACACACCAA TTGTGGTTGT GTTGGCCTTT GCGATTTGTC TGTTGCCATA CTTTTTTGTT
GAGACATATG TATTCAGTCA ATGGTTGTAC CGTGCATTGA TTTTCCTGGT GATCTCCTGC
CCGTGTGCAT TGGTCATTAG TATTCCACTG GGCTATTTCG GCGGCATAGG CGCAGCCAGT
CGAAACGGTA TTTTATTCAA AGGTAGTAAT TTTTTAGACA CGATTTCTAC CATTCAAAAC
GTGGTGATGG ATAAAACCGG CACCATGACG GAAGGTGTCT TTAAAGTACA GGAGGTCAAC
CTCAACCCTG AGTTCAATCG CGATGAAATC CTGAAAATGG TCAATGCACT GGAAAGCCAG
AGTACGCATC CTGTAGCAAC AGCCATTCAT CAATTTGTAG GTGATATTGA TAGCACCATT
AAGTTAAATA ATGTTGAAGA AATATCTGCT CATGGATTGA AAGCCGACGT GAATGGAAAA
GAGTTATTGG TAGGTAATTT TAGATTGCTC GATAAATACG CCGTCACCTA CGATATTGAT
CCCGCCACCA TTGTGTATAC CGTCATCGCT ATTGCCTACG ATCAAAAATT CGCAGGCTAC
ATTACTATCG CCGACAGCAT TAAAGAGGAT GCGCAATTAA CGGTAGATAC ACTGAAAAAA
CTCGGCATCA ACATTACCAT GCTCAGCGGT GACAAAAGTT CTGTGGTGCA ATTTGTCGCA
CAAAAATTAG GCATCATTAA TGCCTTTGGT GATTTGCTGC CAGAAGATAA AGTTAATAAA
GTAAAAGAAA TCAAAGCGCG CAATGAAACC GTTGCGTTCG TAGGTGATGG TGTTAATGAT
GCACCGGTCG TTGCCCTGAG CGATGTCGGT ATCGCGATGG GTGGCCTTGG CAGCGATGCA
ACAATCGAAA CAGCCGATGT TGTTATTCAA GATGATAAAC CCAGCAAAAT TCCCACTGCC
ATCGCCATCG GTAAACAAAC CAAACGCATT GTGTGGCAAA ACATTTCCCT CGCGTTCGGT
GTAAAAGCCA TCGTATTAAT ACTGGGGGCT GGAGGCTTAG CCACAATGTG GGAAGCGGTC
TTTGCGGACG TAGGGGTGGC GCTACTTGCG ATATTGAACG CGGTGCGAAT ACAGAGGATG
AAGTTTTAA
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| Protein sequence | MEHTHEYDEQ GKQLCCTEEE KINNKADVLI KNSPSKSCCC ASDDQDQHVD DDSHDHDHAS
DGGSNIKLFL PAAMSLVALL IAIVLDNYFP QTWFTGWLRI GWYVAAYLPV GLPVLKEAVE
SITKGEVFSE FFLMSIATIG AFAIGEYPEG VAVMLFYSVG EVFQTLAVKR AKLNIKTLLD
QRPDEVTVLR NNQATTLKAE TVSIGDIIQL KAGEKLGLDG ELLTESASFN TAALTGESKP
DTKTKGETVL AGMINLNVVS QVKVTAAYTD SKLSRILELV QNASAQKAPT ELFIRKFAKI
YTPIVVVLAF AICLLPYFFV ETYVFSQWLY RALIFLVISC PCALVISIPL GYFGGIGAAS
RNGILFKGSN FLDTISTIQN VVMDKTGTMT EGVFKVQEVN LNPEFNRDEI LKMVNALESQ
STHPVATAIH QFVGDIDSTI KLNNVEEISA HGLKADVNGK ELLVGNFRLL DKYAVTYDID
PATIVYTVIA IAYDQKFAGY ITIADSIKED AQLTVDTLKK LGINITMLSG DKSSVVQFVA
QKLGIINAFG DLLPEDKVNK VKEIKARNET VAFVGDGVND APVVALSDVG IAMGGLGSDA
TIETADVVIQ DDKPSKIPTA IAIGKQTKRI VWQNISLAFG VKAIVLILGA GGLATMWEAV
FADVGVALLA ILNAVRIQRM KF
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