Gene Sputcn32_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1952 
Symbol 
ID5078400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp2237519 
End bp2238211 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content46% 
IMG OID640499113 
Producthypothetical protein 
Protein accessionYP_001183474 
Protein GI146293050 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGAGT ACAATGTCAC CGGTGCCTTT CTGGTTGGAT TAATGGGCGC AGCACATTGC 
TTTGGTATGT GTGGTGGTCT TGTGGGGGCT TTCTCAGCCC AAATCCCCCA TCCAAAGACG 
GGGAATTTAC TGACGCATCA ACTCAAGTAT TTACTAAGTT ACAATGTAGG TCGTATTTTG 
AGTTATACCT TAGCAGGTTG CTTGGTTGGT GCATCGTCGG CAGGTCTTGG TTATTTATTC 
GAACTCGATA CTTATCTCAT TGTTCTGCGG ATCATTGCTG GACTAATGAT GATAGCAACA 
GGGTTGTATA TCGCTAAAAT TTGGGTCGGA ATAGTGCAGA TTGAGCGTGT CGGGCAATGG 
TTGTGGCAGT ATCTAAAACC CATAGCTCAG CGCCTTGTCC CCATCAAAAA TCCGAGCCAA 
GCGATAATGG CAGGATTTAT TTGGGGCTGG CTCCCCTGCG GTCTTGTCTA TAGCACTTTA 
ACGTGGTCGG TTGCTTCAGG CTCTGCAAGC CAAGGTGCCT TAATCATGTT AGCCTTTGGC 
TTAGGCACCT TACCTTCATT GTTAAGTGCT GGTGTGGCTG CTAAACACCT TGCTGTTTGG 
GTACAAAAGA AAACGGTTAG ACTATTGAGT GGTTTACTAT TAGTTGCCTT TGGTGGCCAA 
ACTTTATATA TCGCACTGTC GCAGCTAAAC TAG
 
Protein sequence
MIEYNVTGAF LVGLMGAAHC FGMCGGLVGA FSAQIPHPKT GNLLTHQLKY LLSYNVGRIL 
SYTLAGCLVG ASSAGLGYLF ELDTYLIVLR IIAGLMMIAT GLYIAKIWVG IVQIERVGQW 
LWQYLKPIAQ RLVPIKNPSQ AIMAGFIWGW LPCGLVYSTL TWSVASGSAS QGALIMLAFG 
LGTLPSLLSA GVAAKHLAVW VQKKTVRLLS GLLLVAFGGQ TLYIALSQLN