Gene Sputcn32_1947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1947 
Symbol 
ID5078395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2233067 
End bp2233879 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content38% 
IMG OID640499108 
Productbax protein, putative 
Protein accessionYP_001183469 
Protein GI146293045 
COG category[R] General function prediction only 
COG ID[COG2992] Uncharacterized FlgJ-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAACAG GTAGAGTTGG TTCATTTACA TTGGCGTTAG CCATAGTGAT ATTAGCGATT 
TTTTCGTTAA GGGTTTTGCT CATTCCTGAG GTGAGTCAGC CAGAGTCCAT TACCAGTCAA
TTGGAACGCG CAGTTACTCC TGTCACTCAA ATCCCTGACT TTTCGGGAAT AAATGATATA
ACGGAAAAAA AGAAAGCTTT TTTTGACTTT TTACGCCCGA TTATTCAACA GCAAAATGCC
ATCATTGAAG AGGAACGTGA TTTAATTAGT GATGCACTGA CTGAGCTGGA GAATGGCGGT
ACTCTTTCAT CGTCACAGTT AACACAATTA AATATGCTGT GTGATAAGTA CCAATATGCA
GCACGTAATA TCGATATTAA ATCTTTGAAT AGTTTGCTAA AACGAGTAGA TATTGTTCCT
GAGTCGATGG TACTTATTCA AGCTGCAAAT GAATCAGGAT GGGGGAGTTC ACGTTTTGCA
CGCGAAGGAT TTAACTTTTT TGGGGAATGG TGCTTTTCAA CAGGCTGCGG CATAGTTCCT
TCATCACGTG GCTCAGGAAA AATGCATGAG GTAAAAGTAT TTTCATCCGT TGATGCCTCA
GTGTCATCTT ATATGCGTAA TTTAAATTCA AACCCTGCTT ATGCTTTATT CCGTTCAATC
CGCGCTGATT TACGTTCACA AGAAGTAGAA CCAACAGCCA ATCAACTCAT CTATGGGTTA
GTGAATTATT CTGAAAGACA AGAAGCTTAT ATCGATGAAT TACTCGATAT GTTACGTCAT
AATGAAAAAT ATTTGGTAAA TGCTGATGCT TAA
 
Protein sequence
MKTGRVGSFT LALAIVILAI FSLRVLLIPE VSQPESITSQ LERAVTPVTQ IPDFSGINDI 
TEKKKAFFDF LRPIIQQQNA IIEEERDLIS DALTELENGG TLSSSQLTQL NMLCDKYQYA
ARNIDIKSLN SLLKRVDIVP ESMVLIQAAN ESGWGSSRFA REGFNFFGEW CFSTGCGIVP
SSRGSGKMHE VKVFSSVDAS VSSYMRNLNS NPAYALFRSI RADLRSQEVE PTANQLIYGL
VNYSERQEAY IDELLDMLRH NEKYLVNADA