| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1940 |
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| Symbol | |
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| ID | 5078388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2224931 |
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| End bp | 2227447 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640499101 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001183462 |
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| Protein GI | 146293038 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0622221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAAA GAACCAAAGT CGCGGCGGCT ATTAATGTCG CAATCGTTAC TTCCATCTCT
GCGGGTACAT TTGTTGCGTC AAACTCATTC GCGGCTGAAG AAACGGCGAA AGTAGAGCGT
ATTGAAGTAA CTGGTTCACG TATTCAACGT CAAGATATGG AAACAGCTTC TCCTGTGACC
GTAATTGATG CTGCAGCGAT TAAAGCGGAA GGTTTTACCT CTGTGGACCA AATGCTACAA
GTTCAAACCT CTATGGCAGG TGCTGCTGTA GGGTCAAGTA CAAATAATGG TGCTGATGGT
GTTGCGCAGG TTGATTTACG CGGTATGGGA TCACAACGTA CATTAGTACT ATTAAATGGC
CGCCGTATGG TGAACTCAGG TTCTGGAGCG GATAGCTCTG TGGATTTGAA TTCTATCCCT
GTAGCTATGA TTGCCCGCGT TGAAATTCTG AAAGATGGTG CTTCAGCGGT TTACGGTTCT
GATGCAATTG CGGGTGTAGT CAACATCATC ACCAAGAAAG ACTTTGAAGG CTTCCAATTA
GATTTTAATG GTAGCGGTAC GGATAAAGGT GATGGTCGCA ATGGCGATGT TAGTGCATTA
TACGGCTTTA ATACCGATGG TGGTAACTAC ACATTTGGTG CGGCGTTTTC GGACCGTCGC
GATGTAATTC AAGCGGATCG TGATTGGACA GCAACAGGAG AAAGCTGGAG TATTCCGACA
GGTGCATTGG ATTACATGGT TAAAGATGCA AATGGTAATT GGGTAGACCA AGAAGAAGTA
TACGATTATA CACAAGACAG CTATTATCAA ACTCCGAGCG AACGTCGCAG CTTATTTGCA
AATATGACCC AAGAGCTGGG TAATGATGTG GTATTAACTG CAGATGCAAT CTATACAAAT
CGTCGTTCCC ATCAGCAAAT GGCCGCTCAG CCTGCAAATA TTGGTCTAAA TGTTTGTGGT
AATGCTAATG TTCCAGCTGG TGCTCCATGC ATAACACTAG ACAGTGCTAT GACAGCCGCA
GGTATAAAAG CAAATGATAA AGGTTTAGTT AACTACCGCC GTCGTACCAA TGAAGTCGGC
CCTCGTATCT ACACTCAGGA TACCGATACT TGGCGCTTAT CTGGTGGTTT AGCGGGTACT
TTAGATGTAC ATACGGGTAT GAATTGGGAT GTCACCTATA CCTATGGTAA AAACAAAGCT
GAAACCGCAG TAGAAAACTC TATCAACGCT ACAGATATGG CCACTTCTAT CTATGCTAAC
CCAGATGCGT GGTTTAGTGG TGCACCACTA ACACAACAAA CTATTAATGC TATCGGTTAT
TCTGAGAAAG CAAATGGCGG CAATGAACAG CAAACATTGT CAGCGGGATT AAATGGTGAG
TTATTTGATC TAAAAGCAGG TGCTGTTGGC TTTGCTATCG GTGCTGAATA TCGCCGTGAA
AGTGGTTTTT ATAATCCCGA CCCAATTGTA GTTGCAGGTG AAAGTACTGC AGCACAGCAA
GATCCAACGG ATGGCAACTA TAATGTTGTC TCTATTTTCC AAGAGGTCAG TGTACCATTT
ACTGAGAAAT TAACAGGTGA ATTTGCACTG CGTTTAGATG ATTACTCTAC TTTCGGTAAA
GCAACCACGT GGAAAATTGG TTTAACTTAT ACCGCTACCG ATGACCTGAT GGTTCGTACT
GTGGCAGCGA CTGGATTCCG AGCACCAAGT GTAGCCGAAT TATATGGTGG TAACTCTGGT
TCATTTGATT ATTTGAAAGA TCCATGGGGC AATATTAAAG ATGCTCAAAT CTTAGTAAAT
CGCACATCAG ATCCAGATCT GCAACCTGAA GAGTCTGAAT CTTACACGGC CGGTTTAGTA
TATTCACCGA GCTACATCGA TGGTATGTCT GTTACATTAG ATTACTGGCG ATTTAAGTTA
GATAACGCTA TTGCACGTAT GGATACTCAA GTTGGTTTGA ATGCTTGTCA TGCAGGTGAT
GCGTCAGCTT GTGAAACTTT CAATATCGGT GCAGGTGGTA ATTTAGATAA TTTAACTAAC
GCACTGACTA ATGTTGGTTC ACAAGACACT AGCGGTATTG ATTTCAATTT AGCTTACAGC
TTTGGATTGA TTGGTTTAGA CTGGAAAGTT AGTAATGACA CCACTTATCT AGTTAAGTTT
GAGCAAGATG GTGAGGAATA TACGGGTACA ATCGATGGTA ACTTCGGTGC TTATGCGCGT
GTTCGTAACA ACTTTAGCAT CTCTGCAGGC CAAGACGATT GGAGTGTAAT GTATTTTAAC
CGTTATATTG GTGATATGCG TGACCTCGCA GAAGGTAATA AAGTAGGTGA TATTATTTAC
CACAACATCT CAGGTACATA TCATATCAAT GATATGACAA CCGTTAGTTT AGGCGTTAAA
AACTTTACTG ATGAAAAACC TGTTACTGTT TCTAACGGTA GCGATGGTGG TACAGTTCCA
GAAGTTTACG ATACTATCGG TCGCACCATT TATGGTGGTG TAACAGTTAA GTTCTAA
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| Protein sequence | MIKRTKVAAA INVAIVTSIS AGTFVASNSF AAEETAKVER IEVTGSRIQR QDMETASPVT
VIDAAAIKAE GFTSVDQMLQ VQTSMAGAAV GSSTNNGADG VAQVDLRGMG SQRTLVLLNG
RRMVNSGSGA DSSVDLNSIP VAMIARVEIL KDGASAVYGS DAIAGVVNII TKKDFEGFQL
DFNGSGTDKG DGRNGDVSAL YGFNTDGGNY TFGAAFSDRR DVIQADRDWT ATGESWSIPT
GALDYMVKDA NGNWVDQEEV YDYTQDSYYQ TPSERRSLFA NMTQELGNDV VLTADAIYTN
RRSHQQMAAQ PANIGLNVCG NANVPAGAPC ITLDSAMTAA GIKANDKGLV NYRRRTNEVG
PRIYTQDTDT WRLSGGLAGT LDVHTGMNWD VTYTYGKNKA ETAVENSINA TDMATSIYAN
PDAWFSGAPL TQQTINAIGY SEKANGGNEQ QTLSAGLNGE LFDLKAGAVG FAIGAEYRRE
SGFYNPDPIV VAGESTAAQQ DPTDGNYNVV SIFQEVSVPF TEKLTGEFAL RLDDYSTFGK
ATTWKIGLTY TATDDLMVRT VAATGFRAPS VAELYGGNSG SFDYLKDPWG NIKDAQILVN
RTSDPDLQPE ESESYTAGLV YSPSYIDGMS VTLDYWRFKL DNAIARMDTQ VGLNACHAGD
ASACETFNIG AGGNLDNLTN ALTNVGSQDT SGIDFNLAYS FGLIGLDWKV SNDTTYLVKF
EQDGEEYTGT IDGNFGAYAR VRNNFSISAG QDDWSVMYFN RYIGDMRDLA EGNKVGDIIY
HNISGTYHIN DMTTVSLGVK NFTDEKPVTV SNGSDGGTVP EVYDTIGRTI YGGVTVKF
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