Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1939 |
Symbol | ruvB |
ID | 5078387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2223005 |
End bp | 2224009 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640499100 |
Product | Holliday junction DNA helicase RuvB |
Protein accession | YP_001183461 |
Protein GI | 146293037 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00566974 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGAAG CAGATAGACT CATCCAGCCG CAACTTCAAG GACAAGATGA TGTTGTGGAT AGGGCAATGC GGCCTAAATT ACTTGATGAA TATACAGGGC AAGATGACAC TCGCGCTCAG CTTAAGGTTT TTATTCAAGC AGCCAAAAAT CGTAATGAAG CCTTAGATCA TATGTTGATT TATGGTCCTC CAGGGCTAGG TAAAACGACA TTAGCGATGA TTGTTGCGAA TGAAATGGGC GTTAATATCA AATCCACCTC AGGTCCTGTG CTTGAAAAAG CAGGGGATTT GGCCGCATTA CTCACGAATT TAGAATCCGG TGATGTGCTA TTTATCGATG AAATTCATCG TTTAAGCCCA GTAGTGGAAG AGATATTGTA TCCAGCAATG GAAGATTATC AACTCGACAT CATGATAGGT GAGGGGCCTG CAGCGCGTTC CATCAAGCTT GATTTACCGC CATTTACTTT AGTAGGTGCA ACCACTCGAG CAGGGGCATT AACATCTCCT TTGCGTGCTC GCTTTGGTAT TCCACTTCGA CTTGAATTTT ATAACATTAA AGATTTAAGC ACGATTGTAA CGCGCTCTGC ACAAGTGATG GGATTAGAGA TTGATACAGA AGGTGCGTTT GAGATTGCAC GACGTTCTCG TGGTACACCA AGGATAGCTA ATCGCTTACT TCGCCGTGTG CGCGACTATG CCGAGGTTAA ACATGATGGT GCGATCACTC AATTTGTTGC CGATCATGCG CTGGATCTAC TCGATGTCGA TAATGAAGGG TTCGACTATA TGGATCGAAA GTTGATGTTA GCCATTATCG ATAAGTTTAT GGGTGGGCCT GTTGGCTTAG ATAACTTAGC CGCTGCAATA GGTGAAGAAC GCGAAACTAT CGAAGATGTG CTAGAGCCTT TTTTGATCCA ACAAGGGTTT ATCCAAAGAA CTCCCAGAGG ACGCATTGCT ACGGCACGTG CGTATCAGCA TTTTCAGTTG ATCAAACCTG AGTAA
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Protein sequence | MIEADRLIQP QLQGQDDVVD RAMRPKLLDE YTGQDDTRAQ LKVFIQAAKN RNEALDHMLI YGPPGLGKTT LAMIVANEMG VNIKSTSGPV LEKAGDLAAL LTNLESGDVL FIDEIHRLSP VVEEILYPAM EDYQLDIMIG EGPAARSIKL DLPPFTLVGA TTRAGALTSP LRARFGIPLR LEFYNIKDLS TIVTRSAQVM GLEIDTEGAF EIARRSRGTP RIANRLLRRV RDYAEVKHDG AITQFVADHA LDLLDVDNEG FDYMDRKLML AIIDKFMGGP VGLDNLAAAI GEERETIEDV LEPFLIQQGF IQRTPRGRIA TARAYQHFQL IKPE
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