Gene Sputcn32_1938 details

Gene Information

• Locus tag: Sputcn32_1938
• Symbol: ruvA
• ID: 5078386
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 2222374
• End bp: 2222991
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640499099
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_001183460
• Protein GI: 146293036
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00077844
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAGGTC GTTTACGTGG TGTGCTGGTT GAAAAACAAG CTCCTGAAAT ACTGATGGAT 
GTTAATGGTG TCGGTTATGA GTTACAGATG CCACTTACCA GCTTTTATGA GCTGCCAGAG 
ATCGATCACG AGACTGTGGT ATACACCCAT TTTGTTGTGC GTGAAGATGC TCAACTCCTT 
TATGGTTTTA TCACTAAGCA GGAGCGGGCA TTGTTCCGCT TACTGATCAA GACCAATGGT 
GTTGGTCCAA AACTCGCCTT AACCATTCTT TCTGGCATGA CGGCATCGGA GTTTGTTGGT 
TGTGTTGAGC GCGATGATAT CGTCACTTTA GTGAAGTTAC CGGGAGTGGG TAAGAAAACC 
GCCGAGCGTT TACTTGTCGA AATGCGCGAT AAGCTCAAGA GCTTGATGGA AGCATCTGCA 
GGCTCAGAGC GTGAGTTCGT GCTGCAATCC AATTATTCAC CCACACCTAC GGTGAATAGT 
GCCGAGGAGG ATGCCATTTC TGCTTTGATC TCTTTGGGTT ACAAACCACC ACAAGCGAGT 
AAATCGGTTT CTGCTGCTTA CAAAGAGGGC ATGGATTCAG AAACCTTGAT TAAAGCTGCA 
CTTAAGTCGA TGCTCTGA 

 

Protein sequence

MIGRLRGVLV EKQAPEILMD VNGVGYELQM PLTSFYELPE IDHETVVYTH FVVREDAQLL 
YGFITKQERA LFRLLIKTNG VGPKLALTIL SGMTASEFVG CVERDDIVTL VKLPGVGKKT 
AERLLVEMRD KLKSLMEASA GSEREFVLQS NYSPTPTVNS AEEDAISALI SLGYKPPQAS 
KSVSAAYKEG MDSETLIKAA LKSML