| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1936 |
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| Symbol | |
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| ID | 5078384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2221006 |
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| End bp | 2221752 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640499097 |
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| Product | hypothetical protein |
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| Protein accession | YP_001183458 |
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| Protein GI | 146293034 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0314464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGGTC ACAGTAAATG GGCCAACATT AAGCACCGTA AAGCAGCGCA AGATGCTAAA
CGCGGTAAAC TCTTTACTAA ATTTATTCGC GAATTAACCG TAGCTGCCCG TGAAGGCGGT
TCAGATCCCG ATTCTAATCC ACGCTTACGA ATCGCCATCG ATAAAGCCCT CGGTGGCAAT
ATGACCCGAG ATACGGTTGA GCGCGCGATT AAACGCGGCG CCGGTGAGTT AGAAGGTCAG
CAACTCGAAA CCATTCTCTA TGAAGGCTAT GGCCCAGGCG GCACCGCTGT GATGGTTGAA
ACCATGACGG ACAATCGTAA TCGTACTGTG AGTGGTGTAC GTAATGCGTT TAGTAAATCA
GGCGGTAACT TAGGCACGGA TGGTTCGGTT TCTTATCTAT TCACTAAGCG TGGCGTGTTA
TCCTACGCGC CTGGGATCGA TGAAGATGCA TTGATGGAAG CGGCGCTTGA AGCGGGCGCG
GAAGACATTA TTAGCTATGA TGATGGCGCG GTGGATGTGT TTACCGATCC CGTTGATTTC
TATACGGTGA AAGAGCTGCT CGATAAAGCC CATTTTGTGG CGGATAATGC CGAAATCGCT
ATGATAGCCT CGACGAAAGC AGAGCTTGAT CTAGAAACCG CTGAAAAATT TATGCGCCTT
ATCGACACCC TTGAAGATCA TGATGATGTG CAAGAGGTGT ATCATAATGC GGAAATCTCC
GATGATGTGA TGGCAAGCCT AGGCTAG
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| Protein sequence | MAGHSKWANI KHRKAAQDAK RGKLFTKFIR ELTVAAREGG SDPDSNPRLR IAIDKALGGN
MTRDTVERAI KRGAGELEGQ QLETILYEGY GPGGTAVMVE TMTDNRNRTV SGVRNAFSKS
GGNLGTDGSV SYLFTKRGVL SYAPGIDEDA LMEAALEAGA EDIISYDDGA VDVFTDPVDF
YTVKELLDKA HFVADNAEIA MIASTKAELD LETAEKFMRL IDTLEDHDDV QEVYHNAEIS
DDVMASLG
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