Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1893 |
Symbol | |
ID | 5078513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2167148 |
End bp | 2167696 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640499054 |
Product | hypothetical protein |
Protein accession | YP_001183415 |
Protein GI | 146292991 |
COG category | [S] Function unknown |
COG ID | [COG3108] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.745932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTTTGA TTTGTCCTGC CCGTCGGCAG TTGTTGTTAG GCTTAGGTGG TGTGGCATTG TATTCATTAC TCCCGTCTAA AGCCGCTGCG AGTCGTTCGA CCAAAGGGAT CCGCGAGTTA AGCCTTTATA ATAGGCATAC GGGGGAGCGT AACGATGGTA GCTATTGGGT TGATGGACAT TACCAAAGTG AAGTGTTAGC TGATTTTAGC CAGTTATTGC GGGACCATCG TCAGAATATT GCGGCTCCCA TGGATAAACG CCTATTTGAT TTACTCTATT CATTAAAAAC GACACTGAAT GTGGATGATG AAATCCACGT GATTTCAGGT TACCGATCAC CAAAGACTAA CGGTATGCTC GCAAATAACA GTGGTGGAGT GGCAAAGAAA AGTTACCACA TGCAGGGCAT GGCGATGGAT ATTGCTATTC CTAGTGTGAA CTTGAAAACA CTGAGAGATG CAGCACTTTC ATTGAAATTA GGTGGTGTGG GTTACTATCC TAAGTCTGGT TTTGTGCACG TTGACTGTGG TCCGGTGAGG CGTTGGTAG
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Protein sequence | MTLICPARRQ LLLGLGGVAL YSLLPSKAAA SRSTKGIREL SLYNRHTGER NDGSYWVDGH YQSEVLADFS QLLRDHRQNI AAPMDKRLFD LLYSLKTTLN VDDEIHVISG YRSPKTNGML ANNSGGVAKK SYHMQGMAMD IAIPSVNLKT LRDAALSLKL GGVGYYPKSG FVHVDCGPVR RW
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