Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1892 |
Symbol | |
ID | 5078512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2165570 |
End bp | 2167024 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640499053 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_001183414 |
Protein GI | 146292990 |
COG category | [S] Function unknown |
COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.313593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCATG CAAAGTTACC TTGGCTTAGC AAGCACGGGC GGCTATTTAA GATTGTCGTT TGCAGCCTGT TATTTTTAGG CATGTTCGTA AGCAATACTC TTAGAGCGAC ATCCCCCTTT GATAGCCGTA TTAATGATAA TTCCTTTCAG CAATATCCCT TCCTCTTAGA ACAGACTCTT TTATTCGATC TAGCGGGTGT AAATCCCTTA TTTAACACAA ATTATCAGGC ATTATCACAG GCTAAAACAG AACCGCTTCA ACCTAATGAT ATGGTTCGCA TGCAAGGGCA GGTGACGGCC TATTGGCAGC ATATTTCAGC TTTATCGGGT TGTGATGCTG TAATGACAAA CAATACAAAC GCGGATCCGA TGAGTGACAT CCATTATCAG GCAGTGCTTA AAAAGATCAG CCAACTTATA CAACTTGAAT CCCAATTTTC TTGGGAAACC TTGATGTTAG AAAACAAACT CACCGTCGGT CAAACTCATC CTATAGTCAA CACTATTGCC AAACGCCTTT GGTTATTAGG AGACATGCCA AAAGAAGTTG ATGTTGAACA AGTCTATACC GATGAGTTGA TGCTAGGTAT TAAGCGTTTT CAACTTCGCC ATGGTTTACA AACCGACGGG GTGATTGGTA AGCAAACCTT ATATTGGTTA AATCAATCAC CTAGACAACG GGCTGTATTA CTCGCAAGAA ATGAATTAAG ACAAAGAATA TTTAGTCGCA AATTAACACC CCGTTATCTG TTAATTAATG TGCCAGCTTT TGAGATGAAA CTGGTTGAAC AGGAACAAAC GGTGTTGACC TCTAAGGTGA TTGTGGGTAA GTCTTCACGG CAAACCCCAA TACTGGATAG TCAAATATCC AGTATTGTGC TTAATCCCAG TTGGCGTGTG CCTAGCAGTA TTTTACGACG GGATATTTTA CCTCATATCC GTAAAGACGG TTATTACCTG CAAGACCGTG AATTTGATGT TTATGATTAT AGTGGACAAT TAATTTTTCA TACGCCGGAA GAATGGCAGG AGCTTGCCTC TTCCCGTTTC CCTTACCAAT TAGTGCAGCG TCCAGGCCCT AAAAATGCGT TAGGTAAATA TAAGTTTCAT TTTGATAATA GTTTTAGCGT CTATTTACAT GGTACTTCTG AACCAGCTCT ATTTAAAAGG GAGAATAGGG CACTTTCATC GGGCTGTATT CGTATTGAGA AAGTCAATGA GTTAGCACAG TGGTTCAAAC GTAATCTTGT TAAAGATAAG GGCTTATGGG ATAGGCTTGC CCCAAATGTA ACGGATCCAC AATGGTTTGC ACTGTCAGAG AAATTACCCG TACATCTGGT TTATTGGACG GCATGGCTTG ATGATAAAGG GCAAGATCAT TATCGCAATG ATATTTATCA TTTGGAGGCC GAGTTTACAA ATGCTGTTAC AAGCTCAATT TTTAACATTC CCTAA
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Protein sequence | MEHAKLPWLS KHGRLFKIVV CSLLFLGMFV SNTLRATSPF DSRINDNSFQ QYPFLLEQTL LFDLAGVNPL FNTNYQALSQ AKTEPLQPND MVRMQGQVTA YWQHISALSG CDAVMTNNTN ADPMSDIHYQ AVLKKISQLI QLESQFSWET LMLENKLTVG QTHPIVNTIA KRLWLLGDMP KEVDVEQVYT DELMLGIKRF QLRHGLQTDG VIGKQTLYWL NQSPRQRAVL LARNELRQRI FSRKLTPRYL LINVPAFEMK LVEQEQTVLT SKVIVGKSSR QTPILDSQIS SIVLNPSWRV PSSILRRDIL PHIRKDGYYL QDREFDVYDY SGQLIFHTPE EWQELASSRF PYQLVQRPGP KNALGKYKFH FDNSFSVYLH GTSEPALFKR ENRALSSGCI RIEKVNELAQ WFKRNLVKDK GLWDRLAPNV TDPQWFALSE KLPVHLVYWT AWLDDKGQDH YRNDIYHLEA EFTNAVTSSI FNIP
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