Gene Sputcn32_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1892 
Symbol 
ID5078512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2165570 
End bp2167024 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content40% 
IMG OID640499053 
Productpeptidoglycan binding domain-containing protein 
Protein accessionYP_001183414 
Protein GI146292990 
COG category[S] Function unknown 
COG ID[COG2989] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.313593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCATG CAAAGTTACC TTGGCTTAGC AAGCACGGGC GGCTATTTAA GATTGTCGTT 
TGCAGCCTGT TATTTTTAGG CATGTTCGTA AGCAATACTC TTAGAGCGAC ATCCCCCTTT
GATAGCCGTA TTAATGATAA TTCCTTTCAG CAATATCCCT TCCTCTTAGA ACAGACTCTT
TTATTCGATC TAGCGGGTGT AAATCCCTTA TTTAACACAA ATTATCAGGC ATTATCACAG
GCTAAAACAG AACCGCTTCA ACCTAATGAT ATGGTTCGCA TGCAAGGGCA GGTGACGGCC
TATTGGCAGC ATATTTCAGC TTTATCGGGT TGTGATGCTG TAATGACAAA CAATACAAAC
GCGGATCCGA TGAGTGACAT CCATTATCAG GCAGTGCTTA AAAAGATCAG CCAACTTATA
CAACTTGAAT CCCAATTTTC TTGGGAAACC TTGATGTTAG AAAACAAACT CACCGTCGGT
CAAACTCATC CTATAGTCAA CACTATTGCC AAACGCCTTT GGTTATTAGG AGACATGCCA
AAAGAAGTTG ATGTTGAACA AGTCTATACC GATGAGTTGA TGCTAGGTAT TAAGCGTTTT
CAACTTCGCC ATGGTTTACA AACCGACGGG GTGATTGGTA AGCAAACCTT ATATTGGTTA
AATCAATCAC CTAGACAACG GGCTGTATTA CTCGCAAGAA ATGAATTAAG ACAAAGAATA
TTTAGTCGCA AATTAACACC CCGTTATCTG TTAATTAATG TGCCAGCTTT TGAGATGAAA
CTGGTTGAAC AGGAACAAAC GGTGTTGACC TCTAAGGTGA TTGTGGGTAA GTCTTCACGG
CAAACCCCAA TACTGGATAG TCAAATATCC AGTATTGTGC TTAATCCCAG TTGGCGTGTG
CCTAGCAGTA TTTTACGACG GGATATTTTA CCTCATATCC GTAAAGACGG TTATTACCTG
CAAGACCGTG AATTTGATGT TTATGATTAT AGTGGACAAT TAATTTTTCA TACGCCGGAA
GAATGGCAGG AGCTTGCCTC TTCCCGTTTC CCTTACCAAT TAGTGCAGCG TCCAGGCCCT
AAAAATGCGT TAGGTAAATA TAAGTTTCAT TTTGATAATA GTTTTAGCGT CTATTTACAT
GGTACTTCTG AACCAGCTCT ATTTAAAAGG GAGAATAGGG CACTTTCATC GGGCTGTATT
CGTATTGAGA AAGTCAATGA GTTAGCACAG TGGTTCAAAC GTAATCTTGT TAAAGATAAG
GGCTTATGGG ATAGGCTTGC CCCAAATGTA ACGGATCCAC AATGGTTTGC ACTGTCAGAG
AAATTACCCG TACATCTGGT TTATTGGACG GCATGGCTTG ATGATAAAGG GCAAGATCAT
TATCGCAATG ATATTTATCA TTTGGAGGCC GAGTTTACAA ATGCTGTTAC AAGCTCAATT
TTTAACATTC CCTAA
 
Protein sequence
MEHAKLPWLS KHGRLFKIVV CSLLFLGMFV SNTLRATSPF DSRINDNSFQ QYPFLLEQTL 
LFDLAGVNPL FNTNYQALSQ AKTEPLQPND MVRMQGQVTA YWQHISALSG CDAVMTNNTN
ADPMSDIHYQ AVLKKISQLI QLESQFSWET LMLENKLTVG QTHPIVNTIA KRLWLLGDMP
KEVDVEQVYT DELMLGIKRF QLRHGLQTDG VIGKQTLYWL NQSPRQRAVL LARNELRQRI
FSRKLTPRYL LINVPAFEMK LVEQEQTVLT SKVIVGKSSR QTPILDSQIS SIVLNPSWRV
PSSILRRDIL PHIRKDGYYL QDREFDVYDY SGQLIFHTPE EWQELASSRF PYQLVQRPGP
KNALGKYKFH FDNSFSVYLH GTSEPALFKR ENRALSSGCI RIEKVNELAQ WFKRNLVKDK
GLWDRLAPNV TDPQWFALSE KLPVHLVYWT AWLDDKGQDH YRNDIYHLEA EFTNAVTSSI
FNIP