Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1885 |
Symbol | |
ID | 5080196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2155117 |
End bp | 2156295 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640499043 |
Product | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) |
Protein accession | YP_001183407 |
Protein GI | 146292983 |
COG category | [C] Energy production and conversion |
COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.88408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAG CAACACTCAA CACTGATACA GTGCACCGTG TCGGCTTCTT GGATAAGGCA TCGCTACACA TTCCTATCCT TCGAATTCTA CAAGCCGACG GCACCACTTA TGAAACCGCG GTTTTGCCTG TGATAGATGA AACCTTAGCC ACTAAAATTT ACGATACCTG TGTATTCACT CGGGTACTTG ATGAACGTAT GCTTGGCGCC CAGCGTCAAG GGCGCATCAG CTTCTACATG ACCTGTACGG GTGAAGAAGC GGCGATTGTC GGCAGTGTGG CCGCACTCGA TCAAGAAGAT GTGATCCTCG CGCAATATCG TGAGCATGCA GCGCTGCGTT ATCGCGGCTT TACTACTGAA CAGTTTATGA ATCAGATGTT CAGTAACGAG AAAGATCTTG GTAAAGGTCG ACAAATGCCA ATCCATTACG GCAGTGCGGC ATTGCATTAT CAAACGATTT CTTCACCGTT AGCCACGCAA ATCCCGCAGG CGACGGGTGT GGGCTACAGC TTAAAAATGC AAGGTAAGCG CAAAGTCGCG GTTTGTTATT TTGGCGAAGG CGCTGCATCG GAAGGGGACT TCCATGCCGG TCTAAACATG GCCGCGGTAC TGAAATGCCC AGTGATTTTC TTCTGTCGTA ACAATGGCTA CGCGATTTCT ACGCCCACCG AAGAGCAGTT TGCCGGTAAC GGTATTGCCA GCCGCGGTGT CGGTTATGGC ATGCACACCA TTCGTGTTGA TGGTAATGAC ATGTTGGCCG TGTTAGCCGC AACCCAGCAA GCCCGTGCCT ATGCGATTGA GCATAATGCG CCTGTGCTGA TTGAAGCCAT GACTTACCGT CTCGGCGCAC ACTCTTCTTC AGACGATCCC TCTGGTTATC GCTCGAAAGA TGAAGAAGCC AAGTGGCAGC AACACGATCC GGTTAAACGC TTCAAATTAT GGCTTATCAA CAAAGGTTGG TTGGCTGAAG CGGATGATGT GAAACTGCAT GAGAAATATC GTGAAGAAGT ATTGGCTGCG GTAAAAGTGG CTGAAAAAAT TCCTGTGCCT ATGCTGGATG AAATTATTGA AGATGTGTAC GACAAGCCGA CGCCAGTGCT GAAAAAGCAA CTCGCCGATC TTAAAGAACA TATCAAGAAA TATCCGCAAG CCTATCCAAA AAGTGCTGGG AGACTATAA
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Protein sequence | MSKATLNTDT VHRVGFLDKA SLHIPILRIL QADGTTYETA VLPVIDETLA TKIYDTCVFT RVLDERMLGA QRQGRISFYM TCTGEEAAIV GSVAALDQED VILAQYREHA ALRYRGFTTE QFMNQMFSNE KDLGKGRQMP IHYGSAALHY QTISSPLATQ IPQATGVGYS LKMQGKRKVA VCYFGEGAAS EGDFHAGLNM AAVLKCPVIF FCRNNGYAIS TPTEEQFAGN GIASRGVGYG MHTIRVDGND MLAVLAATQQ ARAYAIEHNA PVLIEAMTYR LGAHSSSDDP SGYRSKDEEA KWQQHDPVKR FKLWLINKGW LAEADDVKLH EKYREEVLAA VKVAEKIPVP MLDEIIEDVY DKPTPVLKKQ LADLKEHIKK YPQAYPKSAG RL
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