| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1876 |
|---|
| Symbol | |
|---|
| ID | 5080187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 2147266 |
|---|
| End bp | 2148444 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640499034 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001183398 |
|---|
| Protein GI | 146292974 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4394] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000489639 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAA CGCCCTGCTC CAATCATTGG GATATCTTTT GCACTGTTGT CGATAACTAC
GGTGATATCG GCGTCACTTG GCGTTTAGCC AAACAATTGG TGAATGAATA TCAGCTCCCC
GTTAATTTAT GGGTTGACGA TCTTGCAAGC TTCTCCCATA TCTTACCGAC ACTCGATCCA
CGAAAGGCGA TTCAAACTTT CAATGACGTG AATATTATTC ATTGGATAGA GCCTTTACCT
ATAGCGTTTG TCGCAGGAAG TGTGCTCATA GAAGCCTTTG CCTGTGAATT ACCCGAACAG
GTAAAAGAAC AGCTGGTTTA TTTACATCAA CATGCTCCCA AATCTGTACC TGTCTGGCTG
AATTTAGAGT ACCTAAGCGC TGAGGATTGG GTTGAAGGCT GCCATGGTTT GCCTTCATTA
CAAGCCAATG GTTTGAAGAA GTATTTCTAC TTTCCTGGTT TTAGCGCCAA AACGGGTGGA
CTTATCTGCG AACAAGATTT ATTTGCAAAG CGTGATGTAT GGCAAGCTAA CACTGCCAAT
AAATTGCAGC TCTTTACTGA TTTAGGTCTT AAGGGCATTC AGGAACAAGA CACAGTGATT
AGCGTTTTTA GCTATGAGAC CGAGGCGCTA CCCGCATTAT GTGAGTTATG GCAGCAATCG
ACAGTAAAAA TCCATGCACT GATCCCAAAG GGGCGTAGCT TAAACAGTCT GACTCATTTG
CTGCCCTGTG AAATTGCCGC GCTAGTGCCG GGTCAACAGG TAAATCATGG CAATTTAACC
CTGCATATTT TACCTATGAC AGATCAACAT GGGTTTGATC GCCTGCTCTG GAGCTGTGAT
GTTAATATCG TACGCGGTGA AGATAGTTTT CTTCGGGCAC AATGGGCTGC TAAACCTTTT
ATTTGGCACA TTTATCCACA AGAAGATGAC TATCACCTCA TAAAATTAGG AGCTTTTATC
CAACTTTACT GCGATAATCT GCTCCCTGAA ATTGCACAAA CTTGGACTAA CTTGAATTTA
GCATTCAACC AAGGATTGCA ATCTGCCGTG GTAAATCATT GGCAAAACCT TAATCCAGTC
AGTTTGCCCT TGTTGCAACA TGCTAAACAA TGGCCAATTG ACGCAATAAA TGCTGCAGAT
CTCGCAACTC GGCTAGTCCA ATTCGTTAAA AAAAGCTAA
|
|---|
| Protein sequence | MIKTPCSNHW DIFCTVVDNY GDIGVTWRLA KQLVNEYQLP VNLWVDDLAS FSHILPTLDP
RKAIQTFNDV NIIHWIEPLP IAFVAGSVLI EAFACELPEQ VKEQLVYLHQ HAPKSVPVWL
NLEYLSAEDW VEGCHGLPSL QANGLKKYFY FPGFSAKTGG LICEQDLFAK RDVWQANTAN
KLQLFTDLGL KGIQEQDTVI SVFSYETEAL PALCELWQQS TVKIHALIPK GRSLNSLTHL
LPCEIAALVP GQQVNHGNLT LHILPMTDQH GFDRLLWSCD VNIVRGEDSF LRAQWAAKPF
IWHIYPQEDD YHLIKLGAFI QLYCDNLLPE IAQTWTNLNL AFNQGLQSAV VNHWQNLNPV
SLPLLQHAKQ WPIDAINAAD LATRLVQFVK KS
|
|---|
| |