Gene Sputcn32_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1875 
Symbol 
ID5080186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp2146661 
End bp2147221 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content42% 
IMG OID640499033 
Productelongation factor P 
Protein accessionYP_001183397 
Protein GI146292973 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00000405635 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTG CTCATGAAAT CCGTCCTGGT AACGTGATCA TGTTAGATGG CAGCCCATGG 
GTTGTACAGA AAACTGAAAC AACTCGTTCT GGCCGTAACG CTGCTATCGT TAAGTTAAAG 
TTAAAGAACT TACTGCTTAA CTCTGGTACA GAAACCACTT TCAAAGGTGA AGATAAGTTA 
GAAGACATCG TATTAGATCG TCTGGATTGT ACTTATTCTT ACTTTGCTGA TCCTATGTAT 
GTATTTATGG ATGCAGAATA CAACCAATAC GACGTAGAAG CTGAAAACTT AGGTGATGCA 
GCAGCTTATA TCGTTGACGG TATGGAAGAA ACTTGCCAAG TGACTTTCTA TGATGGCAAA 
GCTATCTCTG TTGAAATGCC AACCACTATC GTACGTGAAG TGATCTACAC TGAGCCTTCA 
GCTCGTGGCG ATACTTCAGG TAAAGTGATG AAGCCAGCGA CTATCACTGG CGGCGGCACA 
GTGAGTGTTG CTGACTTCGT GAAAGTAGGC GATAAAATTG AAATCGACAC TCGTACTGGT 
GAATTCAAGA AGCGCGTTTA A
 
Protein sequence
MKTAHEIRPG NVIMLDGSPW VVQKTETTRS GRNAAIVKLK LKNLLLNSGT ETTFKGEDKL 
EDIVLDRLDC TYSYFADPMY VFMDAEYNQY DVEAENLGDA AAYIVDGMEE TCQVTFYDGK 
AISVEMPTTI VREVIYTEPS ARGDTSGKVM KPATITGGGT VSVADFVKVG DKIEIDTRTG 
EFKKRV