| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1872 |
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| Symbol | |
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| ID | 5080183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2142062 |
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| End bp | 2143276 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499030 |
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| Product | aminotransferase AlaT |
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| Protein accession | YP_001183394 |
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| Protein GI | 146292970 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCCTA TCATCAAATC CAACAAACTG GATAGCGTTT GCTATGACAT CCGCGGCCCA
GTGCACAAGG AAGCCAGACG TTTAGAAGAC GAGGGGCATC GAATCCTCAA ACTCAACATT
GGTAATCCAG CCCCCTTCGG TTTTGAAGCG CCAGAGGAAA TTGTGCGCGA TGTGATCCTT
AATTTACCCA GTGCCCAAGG CTACTGTGAG TCAAAAGGAT TATTCTCTGC CCGCAAGGCT
ATCGTGCAGT ATTATCAATC CCTAGGGATT TTTGGTGTTG ATATCGAAGA TATCTATATC
GGTAATGGCG TTTCAGAACT CATTATGATG GCGATGCAAG GTTTGCTGAA TACCGACGAT
GAGATCTTAA TCCCCTCACC AGACTATCCT CTGTGGACTG CGGCAGCCAA CCTCGCGGGC
GGCAAAGCGG TACATTATCG CTGCGATGAA GAAGCAGACT GGTTCCCCGA TCTCAACGAC
ATTAAAAGCA AAATCTCATC ACGTACCCGC GGCATAGTGC TGATTAACCC AAACAACCCA
ACGGGTGCGG TATACAGCAG AGAATTACTG CTGCAAGTGG TTGAACTGTG CCGTCAACAT
GATCTGATCC TATTTGCCGA TGAAATTTAC GACAAAATTT TATACGATGA AGCCAAACAT
ATTCCTGCTG CAGGTTTATC AGACGATATT TTAACTGTTA CGTTTAACGG TCTCTCTAAA
GCTTATCGTG CAGCAGGATT TCGTGTCGGT TGGATGATGT TGTCTGGCAA TCTTAAGGCC
GCTAAAAGTT ACATCGAAGG CTTAGAAATG CTGTCCTCGA TGCGCCTTTG TGCAAACGTG
CCCAATCAAC ATGCGATTCA AACCGCGCTT GGCGGTTACC AAAGCATTAA CGAGCTTATT
TTGCCTAATG GCCGCCTTAC GGTTCAACGG GATGCTTGTT ATGAATTGCT TAACCAAATC
CCCGGCGTGA GCGTGAAAAA ACCAAAGGGT GCACTCTATG CCTTCCCCAA ATTGGATATG
AAAAAATTCA ATCTGCGAGA TGATGAGCGT TTAGTGCTGG ATTTACTCAG GGAAAAGAAA
ATTCTGTTAG TCCATGGTAG CGCCTTTAAC TGGCCAGAGC CCGATCATTT ACGAGTGGTT
TTCTTACCTT ATAAAGAAGA TCTCAACAAA GCGCTGACCG AGTTTGGTGA CTTCCTCGAA
AACTATCGAC AGTAG
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| Protein sequence | MRPIIKSNKL DSVCYDIRGP VHKEARRLED EGHRILKLNI GNPAPFGFEA PEEIVRDVIL
NLPSAQGYCE SKGLFSARKA IVQYYQSLGI FGVDIEDIYI GNGVSELIMM AMQGLLNTDD
EILIPSPDYP LWTAAANLAG GKAVHYRCDE EADWFPDLND IKSKISSRTR GIVLINPNNP
TGAVYSRELL LQVVELCRQH DLILFADEIY DKILYDEAKH IPAAGLSDDI LTVTFNGLSK
AYRAAGFRVG WMMLSGNLKA AKSYIEGLEM LSSMRLCANV PNQHAIQTAL GGYQSINELI
LPNGRLTVQR DACYELLNQI PGVSVKKPKG ALYAFPKLDM KKFNLRDDER LVLDLLREKK
ILLVHGSAFN WPEPDHLRVV FLPYKEDLNK ALTEFGDFLE NYRQ
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