Gene Sputcn32_1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1842 
Symbol 
ID5079209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2106437 
End bp2107606 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content43% 
IMG OID640498992 
Productpeptidase 
Protein accessionYP_001183364 
Protein GI146292940 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.983e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGG TTAGTAACCG ATTTTGGTTT ATGTTGCATG GTTGGGTATC ACTCCCAATC 
TGGTTGTTAT TTAGTTTTAT CTGTTTAACG GGGACGATTG CAGTACTTAG CCACGAACTG
ACGTGGCTCA CTAATCCTGC ATCCCGCGCC GTTAATCCAA ACAATTTGCC AGCAAAGTCG
GTTGATGAAT TAATGGCGGC GGTAAAAAAG GCTCATCCTA CAGCAGAAAT CAGTGGGGCT
ATGACCTTCG AGCCTTATCT TGTCAATGCA GTGATGTTTA CCGATGTGGA TAAACCCTAT
GCAATTGCTT ATGTGAATCA ATACACGGGT GACGTTCAGC AAATTAACGA AGGGCTGACT
TTTATTGGTT TTATGCGTTC ATTACATGGT TGGTTATTAT TTCCATGGCC TGGTAGTTAT
AGCGTAGGGT ATTACCTTGT CTGCTCTATG GCGGTATTGA TGCTGGCGTC TTTAATTACC
GGATTAATTG TTTATAAGCG GTTTTGGCGT AGTTTTTTGG CACCTAAAGT GCGTATTACG
CAAGGGAAAA AAACACTGCT AGCGGATTTA CACAAATTAT CTGGTGTTTG GTCAATTTGG
TTTATCGCCA TTATGAGTGC AACAGGATTA TGGTATTTAG TCCAAGCTGT TTTTTGGCAT
GCTGATATTG ATATCGAGCC TCATGCGCCG TTAATTGTGG CGGAGCAAGT TCCCTTGCTT
AAAGAGGGAG AGACAACTAT ACCCATTCCT GCGGTATCAC TTAATCAAGC TCTTATGATT
GCAAAGGAGC GTTTCCCTGA TTTTCAACCT AGTTATGTGA TGCTGCCAGA GCATAACCGG
GATATGTATC ACCTTAGCGG TAGTGGTGAT CATATTTTTT ATGACCAACA TTCCTATAGC
CTGAGTATTA ATCCTTGGAC GGGGGAAATA GCGAAAGCAT CATCACCCGA AACCATGACG
GGCATGCAAA CCATCATGCA CATTGCCGAT CCGCTGCACT ACGGCACGAT TGGGGGAATT
TGGACCAAGT TTATTTGGTT TGTGTTTGGT TTAATTTTGT CGGGTATGTC AATTACGGGC
TTTATGATGT GGGGATTACG TCATGTCAGA GCCTTTAAAA AAGCAGGATC TGATGACTTA
GCTGCCGATA TGTTAGGGGA GATTCGCTAA
 
Protein sequence
MAKVSNRFWF MLHGWVSLPI WLLFSFICLT GTIAVLSHEL TWLTNPASRA VNPNNLPAKS 
VDELMAAVKK AHPTAEISGA MTFEPYLVNA VMFTDVDKPY AIAYVNQYTG DVQQINEGLT
FIGFMRSLHG WLLFPWPGSY SVGYYLVCSM AVLMLASLIT GLIVYKRFWR SFLAPKVRIT
QGKKTLLADL HKLSGVWSIW FIAIMSATGL WYLVQAVFWH ADIDIEPHAP LIVAEQVPLL
KEGETTIPIP AVSLNQALMI AKERFPDFQP SYVMLPEHNR DMYHLSGSGD HIFYDQHSYS
LSINPWTGEI AKASSPETMT GMQTIMHIAD PLHYGTIGGI WTKFIWFVFG LILSGMSITG
FMMWGLRHVR AFKKAGSDDL AADMLGEIR