Gene Sputcn32_1841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1841 
Symbol 
ID5079208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2104218 
End bp2106308 
Gene Length2091 bp 
Protein Length696 aa 
Translation table11 
GC content44% 
IMG OID640498991 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_001183363 
Protein GI146292939 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000240616 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAT CGCTGTTAGC TACACTCATT TCAAGTCTTT TATTAGCGCC AAGCTCCTAC 
GCTAATGAGC CTCAGTCCAC TACTGATATT GAAGTCATCA GTATTAAGGG AAGTCGTTTA
GATAAAGCCG CAACGGCAAC TGGGTTGCCC TTAACGCTGC GGGAAACGCC ACAATCAGTC
ACCATTATTG ATCAAGAGTT TATTCAAAGT TTCTCACTCA ATAGTGTCGC GGACTTAATG
TTTTTAACCC CTGGCATTTA TGCCCAGAAA GCCGAGACCA ACCGCTATTT CTTTAGCTCC
CGCGGTAATC CCATTACTAA TTTTCAGTTT GATGGCGTCC CCGTTAACTA CTCGAGTTTC
TTTAATGACG CCTCAACCGA CACCATATTA TTTGACCGCG TTGAAGTTGT CCGCGGTGCA
ACAGGACTCT TAACGGGTGC GGGTGAACCA TCTGCAGCAA TTAACCTTAT CCGTAAACGT
CCTAAAGCGG CACCTGGCGG CTATGTCAGC GCAAAAGTCG GTGCATGGGA TAGTTACCGT
GTTGAAGGCG ATGCCTCCGT TGATGTAACA GAGAGTGGTG ATGTGCAGGC ACGCTTTGCC
GCCGCCTATG AAAAATCAGA TAGTTATATT GATCTAGCCG AAGATGAAAA CCTGCAAGTT
TATGGCGTGA TCACTGCAAA ACTCAGTGAT AATACCCTAT TTACCCTAGG TGCTGATTAC
AGTGACCGAG ATCCTAAAGG CTCTACTTGG GGTGGTCTTC CTCTATTTTA TGCTGATGGC
AGCTTAGCTA ATGATTTATC CCGTTCGACC ACAACAGCAG CCTCTTGGTC AAGTTGGCAA
CGCAATGGTG CAAACGTCTT TGCTACGCTT GAACATAATT TTGATAATAA TTGGGACGTC
AAATTTGACG TGGAACATCG TGAAGATGAG ATGGATGGGC ACTTACTTTA TCTCTATGGT
GCGCCAGATA AAACCACAGG TTTAGGTATG GGGGCATCGG CGATGATTTA TCAATCGACC
CGTAAACAAG ATGCCGCGCG GCTATTTGCC TCTGGGCCAT TCGAACTCTT TGGTCGCGAG
CATAAACTTA CCGCAGGTTT ACTATACTCT AAGCAAGATA CGACCGCAGA TTCCTATTAC
CCATTAAATA GCATAAGTAT TGGTAACTTC TTCGAATGGG ATGGCTCCGT CGCTGAACCC
AGTTATCCGT CTACGCCAAT CTATCAAGAA GGTGAGGAAA CTCAAAAAGG GGCCTATCTC
GCGACACAAA TTAATTTACA CGATCAATGG ATGCTGTTAC TGGGTGGCCG CATTAGCCAA
TATAAATTTG AATCAAACGC GGCGGCTGAC TACAACAATA GCGATGTCTT TACGCCCTAT
GCAGGTCTGA TATATAACCT CAACGATAGC ATCTCGATTT ACACCAGTTA TACCGAAATA
TTTCTGCCAC AGGATGCAAG AGACGCAAAC AATAAGCGCT TAGAGCCCAT GACCGGAAAT
AATATTGAAC TGGGCGCAAA AGGGGATTTC TTCGATGAGA AACTGACCGC CAGTATAGCC
GTATTTAAAG TGCAAAAAGA AAATGTGGCA GAACCCGATG ATAACGCCCT TCCCTTACCT
GGTGGCAATT ATCCAATGCA CTTGGTGGAT GGGACCAGTA ACCAAGGTTA TGAAGTTGAG
TTAAACGGTA GACCAACAGA AGACTGGGAT CTGTTTTTCA GCTATACCCA TAGTGAATCA
GAAGATCAAG ATGGTTCAGC CTTTAGCACC TATCTACCAA AGGATCTGAT TCGTTTATCC
TCCCTTTATC ACTTTGATGG TGCACTCGCG GATCTGACAG TCGGCGGTAA CTTAAGCTGG
CAGAGTAAAA TTTACAAAGA CAAAGCAGGT CCCAATGGTG AGCGTTCCGA GCAAGACAGC
TATTATCTCG TGAATCTGAT GACAAGCTAT CAACTGACAG ACGATGCGAA AGTTCAACTA
AATATCAATA ACTTATTTGA TAAAAAATAT TACTCTAGCA TTGATTTTTA CAATCAAGGT
TTCTTCGGCG AACCCCGAAA TATTGAGTTA AGCCTAAGCT ATAATTTCTA G
 
Protein sequence
MQKSLLATLI SSLLLAPSSY ANEPQSTTDI EVISIKGSRL DKAATATGLP LTLRETPQSV 
TIIDQEFIQS FSLNSVADLM FLTPGIYAQK AETNRYFFSS RGNPITNFQF DGVPVNYSSF
FNDASTDTIL FDRVEVVRGA TGLLTGAGEP SAAINLIRKR PKAAPGGYVS AKVGAWDSYR
VEGDASVDVT ESGDVQARFA AAYEKSDSYI DLAEDENLQV YGVITAKLSD NTLFTLGADY
SDRDPKGSTW GGLPLFYADG SLANDLSRST TTAASWSSWQ RNGANVFATL EHNFDNNWDV
KFDVEHREDE MDGHLLYLYG APDKTTGLGM GASAMIYQST RKQDAARLFA SGPFELFGRE
HKLTAGLLYS KQDTTADSYY PLNSISIGNF FEWDGSVAEP SYPSTPIYQE GEETQKGAYL
ATQINLHDQW MLLLGGRISQ YKFESNAAAD YNNSDVFTPY AGLIYNLNDS ISIYTSYTEI
FLPQDARDAN NKRLEPMTGN NIELGAKGDF FDEKLTASIA VFKVQKENVA EPDDNALPLP
GGNYPMHLVD GTSNQGYEVE LNGRPTEDWD LFFSYTHSES EDQDGSAFST YLPKDLIRLS
SLYHFDGALA DLTVGGNLSW QSKIYKDKAG PNGERSEQDS YYLVNLMTSY QLTDDAKVQL
NINNLFDKKY YSSIDFYNQG FFGEPRNIEL SLSYNF