Gene Sputcn32_1824 details

Gene Information

• Locus tag: Sputcn32_1824
• ID: 5079191
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 2081819
• End bp: 2083813
• Gene Length: 1995 bp
• Protein Length: 664 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640498974
• Product: helicase c2
• Protein accession: YP_001183346
• Protein GI: 146292922
• COG category: [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG1199] Rad3-related DNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.678424
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACTCGCT CCCGCCAATC AACCACTCAA GCCTCAGTGG TTAAGCCTTT AGCCTCAAAC 
GGTTCTGTAT CGGTAAGTCG ACTCTCGACT GAAGTGCAAC GTGCATTTTT GCAAGGAGGG 
GTATTGTCGA CGCATATTCA AGGATTTAGT GCTCGGGAAA GTCAAATGCA GATGGCACAA 
GGGGTAAGTG AGGCCATTGC ATCTAAAGGT AATTTAGTGA TTGAGGCGGG CACGGGGGTT 
GGAAAAACCT TTGCCTATTT GATCCCTGCG TTATTGAGCG GCAAACAAGT TATCATTAGT 
ACGGGCAGTA AAAATCTGCA AGAGCAATTA TTTTTTAAAG ATTTACCTGC ACTTACCTCT 
ATGTTTGGGA TTGAGCCTAA ACTCGCCTTA CTCAAGGGGC GTAATAATTA TCTGTGCCAG 
TGGCGACTGG ATAAACAAAT GCGAGAGGCA AGCCATATTG AAGCTCGTTT ACTGGATGAT 
TTATTAAAAA TTAATCAGTG GGCGGGTATC AGTCAGGATG GTGATATTGG TGCGCTTACC 
TCTGTTCCTG AGCATTCTTC TGCGCTGCCA TTAGTGGTGA GTACCAAGGA GACTTGTCTT 
GGCAAGCGCT GCGATTTTTA TGAGGTCTGC TTTACCCGTA AAGCGCGTAG CCGTGCCATG 
GATGCTAAGA TTATCGTCGT TAACCACCAT TTATTTTTCG CTGATAGCGT ATTGAAGGAC 
ACGGGCTTTG CTGAGTTATT GCCCGATCCC GATGTGGTTA TTTTCGATGA GGCACATTTA 
TTACCCGATA TTTGTGTTAA CTATTTTGGT CAACAATGTT CGAGTCGTAC TATCGATGAT 
CTTATTCAAA AGCTACTTGC CATTTATCAA ACAGAACTGA GTGATACTGG GCAAATTGCC 
CAGTTTTGTC AGCGTTGTCT TACCAAATTA AGTGATTGGC ATAATCAGTT ATATTCGGCT 
GGTGAGTCAG ATTGGCGATT GGTGCTAGGC AATAAATTAC TCGCTACTGC CTCATGGGAT 
TTACTGGCAG AGTTAACTGC ACTGCAAAAT TTATTAATGG CTCATATTGG CCGTAGTGAG 
TTATTAGATG ATATCGCGAT TCAGTTGGCT GAGTTAAATA ATAAACTCAA TGTGTTTTTT 
CATTGCGATA ATAATCAGGC CGCCTATAGC GTTGAATTTG GTAGTCGCTT TGTCGTGCTA 
CGTATTTCGC CAATTAATAT TGCCCGAGAG TGTCAGCAGT TATTTGTGCC AGAAACCAGT 
TGGATATTTA CCTCGGCAAC GTTGCAAGTT AATCGCAACC TTGCTCATTT TGCCCGTGAA 
ATGGGGATAG TCGATGCGGC CCAAAGTATT CTCGATAGTC CCTTTGATTA TCCGCGCCAA 
GCCGTATTTT GTGTGCCGAG GCAACTTGGG AATGTGGCAA ATCAACAGCA AGCATTAAAA 
CAACTGGTGG ATGTGTGTGT GCAAGCCATA GATGCGGCGC AAGGACGTAC TTTTATTCTA 
TTTACCAGCC ATAACATGCT GGAGCAAACT GCGTTGGCAC TGCGGGCTCG TACTCAATAT 
CCATTGTTGG TGCAAGGGCA AGCGGGAAAG CAGAGTTTGT TAACTAAGTT TCGTCAGCTT 
GGTAATGCGG TATTACTCGG TACTAGCAGT TTTTGGGAAG GGGTGGATGT CCGCGGCAAG 
CTATTAAGTT GCGTGATTAT CGATAAATTA CCTTTTGTCT CACCTGATGA ACCACTGTAT 
CGCGCACGAG CCGACAACGT GAGTCGTCAA GGGGGCGATC CTTTTACTGA AGTGTCGTTG 
CCTCAGGCGA TTATTGCGCT TAAACAAGGT GTTGGACGTC TTATTCGTGA TGAAAAAGAC 
CGTGGTGTAT TAATCCTTTG CGATAATCGG ATTGTGAATC GCTATTATGG CCAAGCCTTT 
TTAAATTCAC TGCCGCCAAT GGCGCGTACC CGCGACTTAG ATAAAGCATT GGCGTTTTTA 
AGAACCATCC CATAA 

 

Protein sequence

MTRSRQSTTQ ASVVKPLASN GSVSVSRLST EVQRAFLQGG VLSTHIQGFS ARESQMQMAQ 
GVSEAIASKG NLVIEAGTGV GKTFAYLIPA LLSGKQVIIS TGSKNLQEQL FFKDLPALTS 
MFGIEPKLAL LKGRNNYLCQ WRLDKQMREA SHIEARLLDD LLKINQWAGI SQDGDIGALT 
SVPEHSSALP LVVSTKETCL GKRCDFYEVC FTRKARSRAM DAKIIVVNHH LFFADSVLKD 
TGFAELLPDP DVVIFDEAHL LPDICVNYFG QQCSSRTIDD LIQKLLAIYQ TELSDTGQIA 
QFCQRCLTKL SDWHNQLYSA GESDWRLVLG NKLLATASWD LLAELTALQN LLMAHIGRSE 
LLDDIAIQLA ELNNKLNVFF HCDNNQAAYS VEFGSRFVVL RISPINIARE CQQLFVPETS 
WIFTSATLQV NRNLAHFARE MGIVDAAQSI LDSPFDYPRQ AVFCVPRQLG NVANQQQALK 
QLVDVCVQAI DAAQGRTFIL FTSHNMLEQT ALALRARTQY PLLVQGQAGK QSLLTKFRQL 
GNAVLLGTSS FWEGVDVRGK LLSCVIIDKL PFVSPDEPLY RARADNVSRQ GGDPFTEVSL 
PQAIIALKQG VGRLIRDEKD RGVLILCDNR IVNRYYGQAF LNSLPPMART RDLDKALAFL 
RTIP