| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1812 |
|---|
| Symbol | |
|---|
| ID | 5079178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 2061496 |
|---|
| End bp | 2062128 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640498962 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001183335 |
|---|
| Protein GI | 146292911 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAGTTAA CACTTTACGT TAAATTTTTT CTTGGCCTCG TTGCCATCAT CAATCCGATT
GGATTGCTGC CCGTATTTGT GAGTTTGACC AGTCATCAAA CAGAAGCGGA GCGAAACCAT
ACCGGAAAAG TGGCTAACTT TGCGGTAGTG GTTATCTTGC TGGTAACCAT CGTTGCGGGT
CAGCATATTT TAAATATGTT CAGTATCTCA CTTTCGGCTT TTAGGATTGC TGGCGGTAGC
TTGATAGCCA TTATTGCCAT GTCGATGTTG CAGGGTAAGT TAGGCGAGGT GAAACGTAAC
CAAGAGGAAG ACCGCGAATC CTCTGCGATG GAATCCGTTG CTGTGGTGCC CTTAGCGTTA
CCTTTAATGG CAGGGCCCGG TGCCATTAGC TCTGTTATCG TGTTTGCCGC TGAACATAAT
TCCTTATCCA ATTTTATTGC GATGTTTATT ACTGTGATTG TTTTTGGCCT AGTGAGTTTT
TCACTGTTTA GAATGGCTTC CATTATTTAT AAAATTTTAG GTAAAACAGG TATTAACGTG
ATTACCCGTT TGATGGGACT CTTGATGTTA TCTATCGGAA TTGAAGTGAT CGCGGCAGGT
ATTAAAGGGC TTTTCCCTCA ATTGTTCAGC TAA
|
|---|
| Protein sequence | MELTLYVKFF LGLVAIINPI GLLPVFVSLT SHQTEAERNH TGKVANFAVV VILLVTIVAG
QHILNMFSIS LSAFRIAGGS LIAIIAMSML QGKLGEVKRN QEEDRESSAM ESVAVVPLAL
PLMAGPGAIS SVIVFAAEHN SLSNFIAMFI TVIVFGLVSF SLFRMASIIY KILGKTGINV
ITRLMGLLML SIGIEVIAAG IKGLFPQLFS
|
|---|
| |