| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1778 |
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| Symbol | |
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| ID | 5079237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2024428 |
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| End bp | 2025324 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640498927 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001183302 |
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| Protein GI | 146292878 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000181213 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATAA CCTTGAGGCA ACTGGCTGTA TTTGAAGCCG TAGCGCGAAG CGGTCAGGTT
GCTAAAGCCG CGGAGCAAGT TAACCTTTCT CCCCCAGCGA CTTCTATGGC ATTGGCAGAA
TTAGAAAAAC AGCTAAATGC TAGACTTTTT GAACGAATTG GCAATCGTTT ACAATTAAAT
TCCCAAGGCA ATTTGTTACT ACCTCTGGCA ACGGATTTAT TACATAGAGT CGAGCAGATT
GAACAAGCTT TTACTCAGCA AGATGGCGAT CTTATTGGGC ATTTAAGCGT GGGTGCTAGC
TCGACAATCG GTAATTATTT ACTCGCCAAA GCCGCAGTGG CTTTTTGTCA GCAACATCTT
CAAACCCACG TGGATGTCGC AATCACAAAT ACCCAAGATG TGATCCAATC GGTAGCACAA
TTTCGTTCAG AAATGGGCTT TATTGAAGGC TATTGTACTG ATAGTCGATT GAAGGTTGAG
GTGTGGCATA AGGATACATT ACTCGTGTTT TGTCATCCTG CGCACCCGCT TGCTGGCAAA
ATCGTAAAAC CTGCCGCACT TAAAGGACAA TCTTGGGTGC TACGAGAAGA AGGATCTGGC
ACTCGAGAAT ATTTTGTTAA TGCTGCCAAT GAGTTAGATA TGCGTCCCGA GGCTAAATTC
TGCTTTTCTA CGCCGGATGC GATTAAACAT GCTGTCAAGC AAGGTGCAGG ATTAGGCGTA
TTATCAGAGC TTGCTCTAGA TAAGGAGATA AGCCGAAAAG AATTGGCGAT GGTGACAGTT
GAAGGGCTGG TCCTAGAGCG GCAGTTTTAT CGCATTACCC ATAAAAGCCG TCAAGCGACC
TCTTTAGGGC AATCGTTTGT GCAGTTTTGC GGGAATTTCT TCAATATTGC TCACTAG
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| Protein sequence | MRITLRQLAV FEAVARSGQV AKAAEQVNLS PPATSMALAE LEKQLNARLF ERIGNRLQLN
SQGNLLLPLA TDLLHRVEQI EQAFTQQDGD LIGHLSVGAS STIGNYLLAK AAVAFCQQHL
QTHVDVAITN TQDVIQSVAQ FRSEMGFIEG YCTDSRLKVE VWHKDTLLVF CHPAHPLAGK
IVKPAALKGQ SWVLREEGSG TREYFVNAAN ELDMRPEAKF CFSTPDAIKH AVKQGAGLGV
LSELALDKEI SRKELAMVTV EGLVLERQFY RITHKSRQAT SLGQSFVQFC GNFFNIAH
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