Gene Sputcn32_1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1776 
Symbol 
ID5079235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2022701 
End bp2023504 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content43% 
IMG OID640498925 
Producthydroxyacylglutathione hydrolase 
Protein accessionYP_001183300 
Protein GI146292876 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID[TIGR03413] hydroxyacylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.49519e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCACTA TAACAGCGAT TAAAGCCTTT AATGACAATT ATATCTGGGT GTTACAACAA 
ACTCCCCACT CGCAGGTTTA TGTTGTCGAT CCTGGCGATG CTAAGGTCGT TATTGCCTAT
CTGGTCTCCC ATCAGTTAGC ACTCGCTGGT ATTTTGCTCA CGCACCATCA CCAAGATCAT
ACTGGCGGTG TCGGGGAACT TAAACGTTAC GTTGAGCAAA CTTCATCACA AACACTGCAG
GTTTACGGAC CACAAAAAGA AAATATTGCT CATGTCAATG TACCACTTAA TCCTGAAATG
CGAACTGAAC TCACCCTTCC TTTCCTTAAC GCTCAAATAC AAGTGCTGAA CGTGCCAGGC
CATACAGCTG GACATATTGC CTATTTCATT GAGGATGCGC TTTTTTGTGG TGATACTTTA
TTCAGTGCAG GCTGTGGTCG ACTATTTGAA GGCACCGCGG AGCAAATGCT TAGCTCTCTT
ACACTATTAG CCAAACTTCC TGCGAATACT CGAGTTTTCT GCGCCCATGA ATATACCCTC
TCCAATCTTA AATTTGCTCT AACAGTCGAG CCTAACAATC TAAATTTACA GGCATATATG
CAAAAAGCCA CAGAAATGCG TGCTCAAAAT AGCGCTACAA TTCCCTCAAG TATTGCCTTG
GAGCGAGCTA TCAATCCTTT TTTGCGCGTG GGAGAACAAA GCATTATTGA TAGTATAAAA
CAGCATTTTG ATGATCCCGA TCCTATCAAA CTAGATGAAC TCACTTGTTT TACCCGCCTT
CGGCAGTGGA AAGATATTTT TTAG
 
Protein sequence
MLTITAIKAF NDNYIWVLQQ TPHSQVYVVD PGDAKVVIAY LVSHQLALAG ILLTHHHQDH 
TGGVGELKRY VEQTSSQTLQ VYGPQKENIA HVNVPLNPEM RTELTLPFLN AQIQVLNVPG
HTAGHIAYFI EDALFCGDTL FSAGCGRLFE GTAEQMLSSL TLLAKLPANT RVFCAHEYTL
SNLKFALTVE PNNLNLQAYM QKATEMRAQN SATIPSSIAL ERAINPFLRV GEQSIIDSIK
QHFDDPDPIK LDELTCFTRL RQWKDIF