| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1761 |
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| Symbol | |
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| ID | 5079319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2007165 |
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| End bp | 2008838 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640498910 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001183285 |
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| Protein GI | 146292861 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0066805 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACCAGC CTTGGATTAA TCATTTGCCA AAAGATGTGC CTGCTGAAAT CAATGTTGAT
CAGTATTCAT CGCTTGTCGA TATGTTCGAG ACAGCGGTAG CTAAATATGC TGATCAACCT
GCATTTATCA ATATGGGTGC CACACTCACT TATCGTAAAT TGGAAGAGCG TAGCCGTGCC
TTTGCCGCTT ATCTGCAAAA TGAGTTAAAG CTCGAAAAGG GTGATCGTGT TGCGATTATG
ATGCCGAATC TTTTGCAATA TCCTATTGCA TTGTTTGGTG TTTTACGTGC AGGTATGGTG
GTTGTTAACG TCAATCCGCT TTACACTCCC CGTGAGCTTA AGCACCAGTT AATTGATTCC
GGCGCCAAAG CCATTGTCGT CGTATCAAAC TTTGCCCGTA CCTTAGAAGA AGTCGTGGAT
CAAACGCCAG TCAAAAGTGT CATTATTACG GGGCTGGGTG ATTTACTCAG CGCACCGAAG
CGAACTTTAG TGAATTTTGT TGTTAAATAC ATTAAGAAGC TAGTGCCTAA ATATGATTTG
CCCCATGCCT TATCAATGCG CGATACCTTA ACAAGGGGGC GCCGTTTGCA ATATATTAAG
CCAATTATCA CTAATGATGA TTTGGCTTTC TTACAATACA CAGGTGGCAC AACAGGGGTA
TCTAAAGGTG CCATGTTGAC CCACAAAAAT GTGGTTGCAA ACGTGCTCCA AGCCGATGGT
GCGTATTCTC CTACCCTTAA AGATGGTAGT GAGTTTGTCG TCACAGCATT GCCTCTGTAC
CATATTTTTG CGTTAACGGT GAATTGCCTA TTGTTTTTAC ACAAGGGCAG CCAGAATCTT
TTGATCACCA ATCCTCGTGA TATTCCAGCT TTTGTGGCAG AGCTTAAAAA ATACCCTTTC
ACCGCATTAA CTGGGGTGAA TACGTTATTT AATGCGCTTG TGAACAGTGA CGATTTTTCG
CAACTTGATT TTTCCCGTTT AAAGCTGTCT ATCGGTGGTG GTATGGCAGT ACAAAAAGCG
GTTGCGGATA AATGGCAAAA TATTACTAAA ACCCGCTTAC TGGAAGGTTA TGGTTTGACA
GAGGCTTCAC CTCTGCTCAC TTGTTGCCCT TATAATTTAG ATGGTTACAA CGGTTCTATT
GGTTTTCCAG CGCCATCGAC CTTGATCCAA ATACGTGATG ATGCAGGTCA TGTGTTGCCC
CAAGGCGAAA CCGGTGAGTT ATTTGGTAAA GGCCCACAGG TGATGAAAGG CTACTGGCAG
CGTCCAGAAG AAACGGCCAA AGTTATTGAT AAAGATGGTT GGTTAGCCAC GGGCGATATT
GGTTATATGG ACGAAAAAGG CTTTTTCTAT ATCGTTGACC GTAAAAAAGA TATGATTTTA
GTCTCAGGGT TTAACGTCTT CCCTAATGAA GTAGAAGAGG TCGTTGCCCT GCATCCCAAG
GTTATCGAAG TCGCGGCTGT AGGTGTACCA AATGAGGCTA GCGGAGAATT AGTGAAGGTT
TTTGTGGTGG CAAAAGATAA ATCGTTAACC GCAGATGACA TCATTAAGCA TTGTCGTATT
CATTTAACGG GATATAAAGT GCCGAAGCTG GTAGAATTTA GAGACGAGTT ACCTAAAACC
AATGTGGGTA AGATCTTGCG ACGAGAGCTT AGAGACGAAG TTAAGCGTAA GTAA
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| Protein sequence | MDQPWINHLP KDVPAEINVD QYSSLVDMFE TAVAKYADQP AFINMGATLT YRKLEERSRA
FAAYLQNELK LEKGDRVAIM MPNLLQYPIA LFGVLRAGMV VVNVNPLYTP RELKHQLIDS
GAKAIVVVSN FARTLEEVVD QTPVKSVIIT GLGDLLSAPK RTLVNFVVKY IKKLVPKYDL
PHALSMRDTL TRGRRLQYIK PIITNDDLAF LQYTGGTTGV SKGAMLTHKN VVANVLQADG
AYSPTLKDGS EFVVTALPLY HIFALTVNCL LFLHKGSQNL LITNPRDIPA FVAELKKYPF
TALTGVNTLF NALVNSDDFS QLDFSRLKLS IGGGMAVQKA VADKWQNITK TRLLEGYGLT
EASPLLTCCP YNLDGYNGSI GFPAPSTLIQ IRDDAGHVLP QGETGELFGK GPQVMKGYWQ
RPEETAKVID KDGWLATGDI GYMDEKGFFY IVDRKKDMIL VSGFNVFPNE VEEVVALHPK
VIEVAAVGVP NEASGELVKV FVVAKDKSLT ADDIIKHCRI HLTGYKVPKL VEFRDELPKT
NVGKILRREL RDEVKRK
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