Gene Sputcn32_1752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1752 
SymbolrbgA 
ID5079310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1998526 
End bp1999467 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content49% 
IMG OID640498901 
Productribosomal biogenesis GTPase 
Protein accessionYP_001183276 
Protein GI146292852 
COG category[R] General function prediction only 
COG ID[COG1161] Predicted GTPases 
TIGRFAM ID[TIGR03596] ribosome biogenesis GTP-binding protein YlqF 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTC AGTGGTATCC GGGGCATATG CACAAGGCAC GCAAGGAGAT TGAAGAGGCA 
ATGCCTCAGG TCGATCTTGT TATCGAAGTG CTGGACGCAC GTATTCCCTA CAGTAGCGAA
AACCCCATGG TGGCTCAGCT TCGAGGCGAC AAACCTTGTA TCAAACTGCT CAATAAATCT
GATCTAGCTG ATCCAGAGAT CACCGCACAA TGGATTGAAT ACTTAGAGCG TGAGCAAGGC
GTCAAAGCCA CGGCGATCAC AACGCTGCAA GCGGCAATGG TGAAAAAAAT CCCTGATCTC
TGCCGTAAGC TAGTGCCGAG TCGCGATAAA ACCGAAAAAG ACATTCGCAC TATGATCATG
GGAATACCCA ACGTTGGGAA ATCCACCATC ATCAATACCT TAGCTGGCCG TGTTATCGCC
AAAACCGGTA ACGAACCTGC GGTAACCAAA ACCCAGCAAC GGATCAATTT ACGTAACGGT
ATCGTGCTGT CGGATACCCC AGGTATTTTA TGGCCCAAAG TGGATAACGA AGCCAGCAGC
TATCGCCTTG CCGTCACTGG CGCCATTAAA GATACGGCGA TGGAATATGA AGATGTGGCC
CTGTTCGCCG CCAAGTATTT CTTAACCGCT TATCCAAAAG AGATTTGTGA GCGCTATAAC
TTAAGTGAAT TACCCAAGGA TGATGTCGCA CTTCTCGAGG AAATCGGCCG TAAACGTGGT
GCGCTGCGTC CCGGTGGCCG CATCGATATG CACAAGGCAT CAGAGTTATT ACTGCATGAA
TACCGATCAG GAAAAATAGG CTTACTCTCG TTAGAAACGC CTGCGATGGC CGAACTTGAA
AAGATTGAAG TCGCCCGTAT CATGGCCGAA AAAGAAGCAG AGAAAGAAGC TAAGCTGGCA
GCAGAGAGAC TGAAACGTTC AGGCAAACGC CATAACGATT AG
 
Protein sequence
MAIQWYPGHM HKARKEIEEA MPQVDLVIEV LDARIPYSSE NPMVAQLRGD KPCIKLLNKS 
DLADPEITAQ WIEYLEREQG VKATAITTLQ AAMVKKIPDL CRKLVPSRDK TEKDIRTMIM
GIPNVGKSTI INTLAGRVIA KTGNEPAVTK TQQRINLRNG IVLSDTPGIL WPKVDNEASS
YRLAVTGAIK DTAMEYEDVA LFAAKYFLTA YPKEICERYN LSELPKDDVA LLEEIGRKRG
ALRPGGRIDM HKASELLLHE YRSGKIGLLS LETPAMAELE KIEVARIMAE KEAEKEAKLA
AERLKRSGKR HND