Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1752 |
Symbol | rbgA |
ID | 5079310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1998526 |
End bp | 1999467 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640498901 |
Product | ribosomal biogenesis GTPase |
Protein accession | YP_001183276 |
Protein GI | 146292852 |
COG category | [R] General function prediction only |
COG ID | [COG1161] Predicted GTPases |
TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATTC AGTGGTATCC GGGGCATATG CACAAGGCAC GCAAGGAGAT TGAAGAGGCA ATGCCTCAGG TCGATCTTGT TATCGAAGTG CTGGACGCAC GTATTCCCTA CAGTAGCGAA AACCCCATGG TGGCTCAGCT TCGAGGCGAC AAACCTTGTA TCAAACTGCT CAATAAATCT GATCTAGCTG ATCCAGAGAT CACCGCACAA TGGATTGAAT ACTTAGAGCG TGAGCAAGGC GTCAAAGCCA CGGCGATCAC AACGCTGCAA GCGGCAATGG TGAAAAAAAT CCCTGATCTC TGCCGTAAGC TAGTGCCGAG TCGCGATAAA ACCGAAAAAG ACATTCGCAC TATGATCATG GGAATACCCA ACGTTGGGAA ATCCACCATC ATCAATACCT TAGCTGGCCG TGTTATCGCC AAAACCGGTA ACGAACCTGC GGTAACCAAA ACCCAGCAAC GGATCAATTT ACGTAACGGT ATCGTGCTGT CGGATACCCC AGGTATTTTA TGGCCCAAAG TGGATAACGA AGCCAGCAGC TATCGCCTTG CCGTCACTGG CGCCATTAAA GATACGGCGA TGGAATATGA AGATGTGGCC CTGTTCGCCG CCAAGTATTT CTTAACCGCT TATCCAAAAG AGATTTGTGA GCGCTATAAC TTAAGTGAAT TACCCAAGGA TGATGTCGCA CTTCTCGAGG AAATCGGCCG TAAACGTGGT GCGCTGCGTC CCGGTGGCCG CATCGATATG CACAAGGCAT CAGAGTTATT ACTGCATGAA TACCGATCAG GAAAAATAGG CTTACTCTCG TTAGAAACGC CTGCGATGGC CGAACTTGAA AAGATTGAAG TCGCCCGTAT CATGGCCGAA AAAGAAGCAG AGAAAGAAGC TAAGCTGGCA GCAGAGAGAC TGAAACGTTC AGGCAAACGC CATAACGATT AG
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Protein sequence | MAIQWYPGHM HKARKEIEEA MPQVDLVIEV LDARIPYSSE NPMVAQLRGD KPCIKLLNKS DLADPEITAQ WIEYLEREQG VKATAITTLQ AAMVKKIPDL CRKLVPSRDK TEKDIRTMIM GIPNVGKSTI INTLAGRVIA KTGNEPAVTK TQQRINLRNG IVLSDTPGIL WPKVDNEASS YRLAVTGAIK DTAMEYEDVA LFAAKYFLTA YPKEICERYN LSELPKDDVA LLEEIGRKRG ALRPGGRIDM HKASELLLHE YRSGKIGLLS LETPAMAELE KIEVARIMAE KEAEKEAKLA AERLKRSGKR HND
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