Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1749 |
Symbol | |
ID | 5079307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1996522 |
End bp | 1997004 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640498898 |
Product | protein tyrosine phosphatase |
Protein accession | YP_001183273 |
Protein GI | 146292849 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTAAAAA TGCAATATAA TTATCGGATC TTGATGGTAT GTATGGGCAA TATTTGCCGT TCGCCCACAG CAGAGGCCGT CTGTCGCGCT AAAATTCGTG AGCGTCACCT TAATATCGAA GTCGACTCGG CGGGAACTAT TGGTTATCAC CAAGGGGATA AGCCCGATAG CCGCGCTATT GAGGCTGGTA AAAAGCGGGG TTTTAGTTTC GAGGGCATGC GGGCGCGGCA GGTAGTGAAT GCTGATTTTG AGCATTTTGA TTTAATTCTA GCTGCGGATA ATGCCAATTT GGCGGATCTG CTTAGCCGTT GTCCGGTTGA GTATCAACAC AAGTTACAGT TAATGTTGTC CTATGCTGAT ACGCAAATAA CGGAAGTACC AGATCCTTAC TATGGCGGCG CACAGGGTTT TGAACTAGTG CTCGATCTCC TCGAGCAGAG TATGGAAGCT TTATTAGATC AATTGACCGA AAAGTTCCGT TGA
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Protein sequence | MLKMQYNYRI LMVCMGNICR SPTAEAVCRA KIRERHLNIE VDSAGTIGYH QGDKPDSRAI EAGKKRGFSF EGMRARQVVN ADFEHFDLIL AADNANLADL LSRCPVEYQH KLQLMLSYAD TQITEVPDPY YGGAQGFELV LDLLEQSMEA LLDQLTEKFR
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