| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1748 |
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| Symbol | |
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| ID | 5079306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1995539 |
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| End bp | 1996468 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640498897 |
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| Product | DNA ligase |
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| Protein accession | YP_001183272 |
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| Protein GI | 146292848 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCATA CAAGCCAATT ATTTCTTTTA ATCTCTAATC CTTTCATTCT GTTGCGGTTA
TTATTAGTTT CCTTGCTGCT GGTATGTCTA TTGGTTAATG CCAACCCCAG TGCGCCTAAG
ATCCAACTTG CCACAGAGCT GACTGCCGAC AAGACGAGTT ATGATATTCG CGAGTTTTTA
ATCAGTGAAA AGTTAGATGG TGTCCGTGGG TACTGGACTG GGCATAGGTT AGTCACCCGT
CAAGGATATC CCATTAATGC ACCCGTATGG TTTACTGCTG ATTTTCCGAC AATTCCTATT
GATGGAGAGT TGTGGCTTGG GCGAGGGCAG TTTGAAGCTA TTTCAAGTTT AATCCGTCAA
TCCTCTCCCA AAGAGGACGC ATGGCGTAAT GTACGCTTTA TGGTATTTGA CTTACCCAAA
GCGGAGGGGA ATTTTGAGCA GCGCTATCGA TTAGCGATAA AGATGTTTGC AGGTAAATCT
GCTTATATTG AGGTCATTGA GCAATTTCAG CTTGATAGTA TTGAGGCTTT ATACCAAAAA
CTCGATAGTC TTGTGGTTTT AGGTGCTGAA GGGTTAATGC TCCATCGCCG CAGTGCATAC
TATATTGCAG GCCGAAATCC AAACTTGATG AAGTTAAAAC CCTACTTTGA TGCAGAAGCT
AAAGTCATTG CACATATTGC AGGTAAAGGT CAATTTACGG GACAGATGGG GGCATTAAAA
GTACAAACAT CCGATGGACG GATTTTTAGT ATCGGAACAG GCTTTAGTCA TGCTGAGCGC
CAACATCCCC CCGCAGTGGG CACTATCATC ACCTATAAAT ACCTTGGGCT TACCGTTAAC
GGTTTACCGC GGTTTGCCAG TTTTTTACGG GTAAGAACCG ATATAGTCGA GTCCCCATTG
GACGGCGGTG TTGACCGTTC TGGGCAATAA
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| Protein sequence | MTHTSQLFLL ISNPFILLRL LLVSLLLVCL LVNANPSAPK IQLATELTAD KTSYDIREFL
ISEKLDGVRG YWTGHRLVTR QGYPINAPVW FTADFPTIPI DGELWLGRGQ FEAISSLIRQ
SSPKEDAWRN VRFMVFDLPK AEGNFEQRYR LAIKMFAGKS AYIEVIEQFQ LDSIEALYQK
LDSLVVLGAE GLMLHRRSAY YIAGRNPNLM KLKPYFDAEA KVIAHIAGKG QFTGQMGALK
VQTSDGRIFS IGTGFSHAER QHPPAVGTII TYKYLGLTVN GLPRFASFLR VRTDIVESPL
DGGVDRSGQ
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