Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1730 |
Symbol | |
ID | 5079288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1972030 |
End bp | 1972911 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640498879 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001183254 |
Protein GI | 146292830 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATAC GTCAACTCAA ACATTTAGAC GCCCTTGCTA ACACTGGCAG CTTTACTGCT GCGGCTAAAA AACTCAATAT GGCGCAACCT GCGCTCAGTC AGAGTATTAA ACGTCTTGAG CAATCCCTAG GTGTTACCTT AATCAATCGT ACTAGCCATA AAAATGACAA ACTACTGGCC CTCACCGCTG AAGGTTTAGT ACTCCATCAA CATGCCACGC TTATCCTAAA GCAAATCAAA CAGGCCGAGG CACAAATCCA TGCAATGGCC AATCTCACCT CGGGTGAAGT GCGTATTGCA GTGCCGGGTA TGCTCGGTTC CTTCTATTTA CCCTCGCGGT TAATGGCCTT TCGCCATCAA TACCCCGAGC TAAAACTGTC ACTGTTTGAA GGCGGCACCC GCGATGCACT ACGTATGTTA CAGCAAGAAG AAGTGGATAT TGCGATTATT ACCGCCCAAG ATCTACAGAG TGATTTTGAC AGTCAACTGT TAATCCGTGA ACAAATGGTG ATTGCAATGG GGACAGAACA TCCATTAGCA GAACACAATG CTGTTAGCTT GAGCGATTTT TTTGACCATG AATTAGTGAT GTTTAAGACA GGTTATTTTC ACCGTGAATG GATACTGTCA CAGGCAAAAG TGTTAGGAAA AAAGCCCAAT ATTGCCTTTG AAACCAATCT GATTAACTTG ATAAAACAAA TTGTATCCCA AGGCTTTGGT ATCACCAGTG TGCTGGAAAT GGCGATCAGC CCGAAGGACG ATATTTTAGC TAAACCCTTC GATCCACCCG TCTTTTTAAA TCTGCATATT GCGTGGAAAA AACAGCGTCC AGTCAGTCAA GCCGACCGTG CTTTTGTCGA GTTTCTGATG AAGAATCGCT AA
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Protein sequence | MDIRQLKHLD ALANTGSFTA AAKKLNMAQP ALSQSIKRLE QSLGVTLINR TSHKNDKLLA LTAEGLVLHQ HATLILKQIK QAEAQIHAMA NLTSGEVRIA VPGMLGSFYL PSRLMAFRHQ YPELKLSLFE GGTRDALRML QQEEVDIAII TAQDLQSDFD SQLLIREQMV IAMGTEHPLA EHNAVSLSDF FDHELVMFKT GYFHREWILS QAKVLGKKPN IAFETNLINL IKQIVSQGFG ITSVLEMAIS PKDDILAKPF DPPVFLNLHI AWKKQRPVSQ ADRAFVEFLM KNR
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